The Jamaican boa (Epicrates subflavus; also called Yellow boa) is an endemic species whose natural populations greatly and constantly declined since the late 19th century, mainly because of predation by introduced species, human persecution, and habitat destruction. In-situ conservation of the Jamaican boa is seriously hindered by the lack of information on demographic and ecological parameters as well as by a poor understanding of the population structure and species distribution in the wild. Here, using nine nuclear microsatellite loci and a fragment of the mitochondrial cytochrome b gene from 87 wild-born individuals, we present the first molecular genetic analyses focusing on the diversity and structure of the natural populations of the Jamaican boa. A model-based clustering analysis of multilocus microsatellite genotypes identifies three groups that are also significantly differentiated on the basis of F-statistics. Similarly, haplotypic network reconstruction methods applied on the cytochrome b haplotypes isolated here identify two well-differentiated haplogroups separated by four to six fixed mutations. Bayesian and metaGA analyses of the mitochondrial data set combined with sequences from other Boidae species indicate that rooting of the haplotypic network occurs most likely between the two defined haplogroups. Both analyses (based on nuclear and mitochondrial markers) underline an Eastern vs. (Western + Central) pattern of differentiation in agreement with geological data and patterns of differentiation uncovered in other vertebrate and invertebrate Jamaican species. Our results provide important insights for improving management of ex-situ captive populations and for guiding the development of proper in-situ species survival and habitat management plans for this spectacular, yet poorly known and vulnerable, snake.
Despite the attention given to them, the Galápagos have not yet finished offering evolutionary novelties. When Darwin visited the Galápagos, he observed both marine (Amblyrhynchus) and land (Conolophus) iguanas but did not encounter a rare pink blackstriped land iguana (herein referred to as ''rosada,'' meaning ''pink'' in Spanish), which, surprisingly, remained unseen until 1986. Here, we show that substantial genetic isolation exists between the rosada and syntopic yellow forms and that the rosada is basal to extant taxonomically recognized Galápagos land iguanas. The rosada, whose present distribution is a conundrum, is a relict lineage whose origin dates back to a period when at least some of the present-day islands had not yet formed. So far, this species is the only evidence of ancient diversification along the Galápagos land iguana lineage and documents one of the oldest events of divergence ever recorded in the Galápagos. Conservation efforts are needed to prevent this form, identified by us as a good species, from extinction.genetic isolation ͉ molecular phylogeny ͉ evolution ͉ islands ͉ lizards S ince Darwin's pioneering work in the archipelago, the Galápagos Islands have been a major scientific resource for evolutionary biologists. This archipelago, currently consisting of about a dozen volcanic islands and more than 100 associated islets, is located on the equator, about 1,000 kilometers west of the South-American coast (Fig. 1). Given their volcanic origin, the Galápagos Islands host unique flora and fauna that have evolved over millions of years in geographic isolation, generating a variety of endemic species with unique and varied ecological, morphological, and behavioral adaptations (1, 2).Land iguanas are among the most spectacular representative species of the Galápagos Islands. They once lived in many areas of the Galápagos archipelago (Fig. 1). Currently, many factors contribute to their threatened status (3), one of which may be incomplete taxonomy (4). Two species of Galápagos land iguanas are currently recognized: Conolophus pallidus and Conolophus subcristatus, with the former occurring only on Santa Fe, whereas C. subcristatus occurs on Fernandina, Isabela, Santa Cruz, Plaza Sur, Seymour Norte (a translocated population), and Baltra.Charles Darwin visited the Galápagos in 1835. During the 5 weeks of his stay in the archipelago, he did not explore Volcan Wolf (the northernmost volcano in Isabela). Thus, although he noticed and commented on both marine and land iguanas (5), he did not encounter a distinct form of land iguana that occurs only on that volcano. Perhaps even more surprising, this form (herein referred to as ''rosada,'' † meaning ''pink'' in Spanish) remained unrecorded despite many other scientists having visited Volcan Wolf over the past century. Since it was accidentally seen by some Galápagos National Park rangers in 1986, this form has received no attention. The rosada form is characterized by a distinct phenotype (Fig. 2). It can be clearly distinguished from the syntopic...
Inequality in distribution of resources is a key aspect of evolutionary biology particularly in relation to distribution of mates and copulations. Notwithstanding its important role, inequality is not easily defined, and its measurement is complicated by theoretical and methodological issues. Although the formal treatment of inequality has been mostly limited to the evolution of lek mating system, a methodologically correct approach to measurement of inequality is generally valid for the study of any kind of mating system. In this paper, we analyze inequality in a large set of southern elephant seal (Mirounga leonina) harems. The observed distribution of fertilizations was significantly different from both the expected distribution with equal shares of resources and the expected distribution with equal propensities to acquire resources. We calculate and compare various measures of inequality, observing a wide variation particularly among unbounded and bounded indices. We check the effect of choosing a specific measure of inequality by considering the effect of two aspects of harem socionomy, the number of females in the harem (i.e., the total amount of resources to be shared) and the number of males associated with the harem (i.e., the number of competitors). The choice of a specific measure of inequality had a strong impact on the results obtained and should be considered a critical step in every study of functional and evolutionary correlates of inequality. Unbounded indices showed a strong relationship with both harem size and number of males, while no effect was evident in the analysis of bounded indices. This demonstrates that, in this species, the despotism of the mating system remains high even in large harems and with many competitors, i.e., the worst conditions for monopolization.Résumé : L'inégalité dans la répartition des ressources, particulièrement la répartition des partenaires sexuels et des accouplements, est l'un des facteurs clés de la biologie évolutive. Malgré son rôle important, l'inégalité est difficile à dé-finir et à mesurer à cause de problèmes théoriques et méthodologiques. À ce jour, l'inégalité a été étudiée surtout dans le contexte de l'évolution du système d'accouplement sur leks; une approche méthodologiquement correcte de la mesure de l'inégalité devrait être valide pour l'étude de n'importe quel système d'accouplement. Nous analysons ici l'inégalité au sein d'une grande série de harems d'éléphants de mer (Mirounga leonina). La répartition observée des fé-condations diffère significativement de la répartition théorique prévue lorsque les ressources sont réparties également et diffère aussi de la répartition à laquelle on peut s'attendre lorsque les animaux ont tous la même propension à chercher à obtenir la ressource. Nous calculons et comparons diverses mesures de l'inégalité et obtenons une grande variation, particulièrement entre les indices non bornés et les indices bornés. Nous vérifions les effets du choix d'une mesure spécifique de l'inégalité en tenant compte de deux aspect...
Mediterranean populations of brown trout (Salmo trutta L. complex) have lost a large part of their genetic distinctiveness, mostly due to massive restocking, and the waters of the Gardens of Ninfa (province of Latina, central Italy, Site of Community Importance since 2013) are regarded as one of a few potential reservoirs of autochthonous trout lineages in the Tyrrhenian drainage of the Italian peninsula. In this study, nuclear and mitochondrial markers were used on brown trout samples from Ninfa to estimate non-Mediterranean influence in the population gene pool, potential changes of genetic structure over time and genetic relationships with other sites known (or suspected) to host native trout gene pools. Striking changes in both microsatellite and mtDNA allele frequencies over a 9-year time span were found and provided evidence of unrecorded stocking from the nearby Lake Fibreno. Results are analysed in the light of potential ecological consequences of such events on a longer time scale and provide a scientific background for fisheries management and conservation programmes in the area
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