Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects.We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives. Geosphere-Biosphere Program (IGBP) and DIVERSITAS, the TRY database (TRY-not an acronym, rather a statement of sentiment; https ://www.try-db.org; Kattge et al., 2011) was proposed with the explicit assignment to improve the availability and accessibility of plant trait data for ecology and earth system sciences. The Max Planck Institute for Biogeochemistry (MPI-BGC) offered to host the database and the different groups joined forces for this community-driven program. Two factors were key to the success of TRY: the support and trust of leaders in the field of functional plant ecology submitting large databases and the long-term funding by the Max Planck Society, the MPI-BGC and the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, which has enabled the continuous development of the TRY database.

Empirical vegetation indices derived from spectral reflectance data are widely used in remote sensing of the biosphere, as they represent robust proxies for canopy structure, leaf pigment content, and, subsequently, plant photosynthetic potential. Here, we generalize the broad family of commonly used vegetation indices by exploiting all higher-order relations between the spectral channels involved. This results in a higher sensitivity to vegetation biophysical and physiological parameters. The presented nonlinear generalization of the celebrated normalized difference vegetation index (NDVI) consistently improves accuracy in monitoring key parameters, such as leaf area index, gross primary productivity, and sun-induced chlorophyll fluorescence. Results suggest that the statistical approach maximally exploits the spectral information and addresses long-standing problems in satellite Earth Observation of the terrestrial biosphere. The nonlinear NDVI will allow more accurate measures of terrestrial carbon source/sink dynamics and potentials for stabilizing atmospheric CO2 and mitigating global climate change.

Abstract. The terrestrial forest carbon pool is poorly quantified, in particular in regions with low forest inventory capacity. By combining multiple satellite observations of synthetic aperture radar (SAR) backscatter around the year 2010, we generated a global, spatially explicit dataset of above-ground live biomass (AGB; dry mass) stored in forests with a spatial resolution of 1 ha. Using an extensive database of 110 897 AGB measurements from field inventory plots, we show that the spatial patterns and magnitude of AGB are well captured in our map with the exception of regional uncertainties in high-carbon-stock forests with AGB >250 Mg ha−1, where the retrieval was effectively based on a single radar observation. With a total global AGB of 522 Pg, our estimate of the terrestrial biomass pool in forests is lower than most estimates published in the literature (426–571 Pg). Nonetheless, our dataset increases knowledge on the spatial distribution of AGB compared to the Global Forest Resources Assessment (FRA) by the Food and Agriculture Organization (FAO) and highlights the impact of a country's national inventory capacity on the accuracy of the biomass statistics reported to the FRA. We also reassessed previous remote sensing AGB maps and identified major biases compared to inventory data, up to 120 % of the inventory value in dry tropical forests, in the subtropics and temperate zone. Because of the high level of detail and the overall reliability of the AGB spatial patterns, our global dataset of AGB is likely to have significant impacts on climate, carbon, and socio-economic modelling schemes and provides a crucial baseline in future carbon stock change estimates. The dataset is available at https://doi.org/10.1594/PANGAEA.894711 (Santoro, 2018).

This paper reviews the most important information fusion data-driven algorithms based on Machine Learning (ML) techniques for problems in Earth observation. Nowadays we observe and model the Earth with a wealth of observations, from a plethora of different sensors, measuring states, fluxes, processes and variables, at unprecedented spatial and temporal resolutions. Earth observation is well equipped with remote sensing systems, mounted on satellites and airborne platforms, but it also involves in-situ observations, numerical models and social media data streams, among other data sources. Data-driven approaches, and ML techniques in particular, are the natural choice to extract significant information from this data deluge. This paper produces a thorough review of the latest work on information fusion for Earth observation, with a practical intention, not only focusing on describing the most relevant previous works in the field, but also the most important Earth observation applications where ML information fusion has obtained significant results. We also review some of the most currently used data sets, models and sources for Earth observation problems, describing their importance and how to obtain the data whether needed. Finally, we illustrate the application of ML data fusion with a representative set of case studies, as well as we discuss and outlook the near future of the field.

Remote sensing optical sensors onboard operational satellites cannot have high spectral, spatial and temporal resolutions simultaneously. In addition, clouds and aerosols can adversely affect the signal contaminating the land surface observations. We present a HIghly Scalable Temporal Adaptive Reflectance Fusion Model (HISTARFM) algorithm to combine multispectral images of different sensors to reduce noise and produce monthly gap free high resolution (30 m) observations over land. Our approach uses images from the Landsat (30 m spatial resolution and 16 day revisit cycle) and the MODIS missions, both from Terra and Aqua platforms (500 m spatial resolution and daily revisit cycle). We implement a bias-aware Kalman filter method in the Google Earth Engine (GEE) platform to obtain fused images at the Landsat spatial-resolution. The added bias correction in the Kalman filter estimates accounts for the fact that both model and observation errors are temporally auto-correlated and may have a non-zero mean. This approach also enables reliable estimation of the uncertainty associated with the final reflectance estimates, allowing for error propagation analyses in higher level remote sensing products. Quantitative and qualitative evaluations of the generated products through comparison with other state-of-the-art methods confirm the validity of the approach, and open the door to operational applications at enhanced spatio-temporal resolutions at broad continental scales.

This paper proposes a processing chain for the derivation of global Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fraction Vegetation Cover (FVC), and Canopy water content (CWC) maps from 15-years of MODIS data exploiting the capabilities of the Google Earth Engine (GEE) cloud platform. The retrieval chain is based on a hybrid method inverting the PROSAIL radiative transfer model (RTM) with Random forests (RF) regression. A major feature of this work is the implementation of a retrieval chain exploiting the GEE capabilities using global and climate data records (CDR) of both MODIS surface reflectance and LAI/FAPAR datasets allowing the global estimation of biophysical variables at unprecedented timeliness. We combine a massive global compilation of leaf trait measurements (TRY), which is the baseline for more realistic leaf parametrization for the considered RTM, with large amounts of remote sensing data ingested by GEE. Moreover, the proposed retrieval chain includes the estimation of both FVC and CWC, which are not operationally produced for the MODIS sensor. The derived global estimates are validated over the BELMANIP2.1 sites network by means of an inter-comparison with the MODIS LAI/FAPAR product available in GEE. Overall, the retrieval chain exhibits great consistency with the reference MODIS product (R 2 = 0.87, RMSE = 0.54 m 2 /m 2 and ME = 0.03 m 2 /m 2 in the case of LAI, and R 2 = 0.92, RMSE = 0.09 and ME = 0.05 in the case of FAPAR). The analysis of the results by land cover type shows the lowest correlations between our retrievals and the MODIS reference estimates (R 2 = 0.42 and R 2 = 0.41 for LAI and FAPAR, respectively) for evergreen broadleaf forests. These discrepancies could be attributed mainly to different product definitions according to the literature. The provided results proof that GEE is a suitable high performance processing tool for global biophysical variable retrieval for a wide range of applications.

Abstract. The terrestrial forest carbon pool is poorly quantified, in particular in regions with low forest inventory capacity. By combining multiple satellite observations of synthetic aperture radar (SAR) backscatter around the year 2010, we generated a global, spatially explicit dataset of above-ground forest biomass (dry mass, AGB) with a spatial resolution of 1 ha. Using an extensive database of 110,897 AGB measurements from field inventory plots, we show that the spatial patterns and magnitude of AGB are well captured in our map with the exception of regional uncertainties in high carbon stock forests with AGB > 250 Mg ha−1 where the retrieval was effectively based on a single radar observation. With a total global AGB of 522 Pg, our estimate of the terrestrial biomass pool in forests is lower than most estimates published in literature (426–571 Pg). Nonetheless, our dataset increases knowledge on the spatial distribution of AGB compared to the global Forest Resources Assessment (FRA) by the Food and Agriculture Organization (FAO) and highlights the impact of a country’s national inventory capacity on the accuracy of the biomass statistics reported to the FRA. We also reassessed previous remote sensing AGB maps, and identify major biases compared to inventory data, up to 120 % of the inventory value in dry tropical forests, in the sub-tropics and temperate zone. Because of the high level of detail and the overall reliability of the AGB spatial patterns, our global dataset of AGB is likely to have significant impacts on climate, carbon and socio-economic modelling schemes, and provides a crucial baseline in future carbon stock changes estimates. The dataset is available at: https://doi.pangaea.de/10.1594/PANGAEA.894711 (Santoro, 2018).

Plant functional traits (‘traits’) are essential for assessing biodiversity and ecosystem processes, but cumbersome to measure. To facilitate trait measurements, we test if traits can be predicted through visible morphological features by coupling heterogeneous photographs from citizen science (iNaturalist) with trait observations (TRY database) through Convolutional Neural Networks (CNN). Our results show that image features suffice to predict several traits representing the main axes of plant functioning. The accuracy is enhanced when using CNN ensembles and incorporating prior knowledge on trait plasticity and climate. Our results suggest that these models generalise across growth forms, taxa and biomes around the globe. We highlight the applicability of this approach by producing global trait maps that reflect known macroecological patterns. These findings demonstrate the potential of Big Data derived from professional and citizen science in concert with CNN as powerful tools for an efficient and automated assessment of Earth’s plant functional diversity.