A functional cDNA clone for a third isoform of the mouse prostaglandin-E-receptor EP, subtype, derived by alternative RNA splicing, named the EP,, receptor, was obtained in addition to those for the two other isoforms, EP,,, and EP,,. The three isoforms are only different in the amino acid sequence of the putative cytoplasmic carboxy-terminal tail. When expressed, EP,,. shows identical ligand-binding properties to these of the other isoforms. The EP,-selective agonist, M&B 28767, increased the basal CAMP level and inhibited the forskolin-induced increase in the CAMP level in EP,,., while it decreased both the basal and forskolin-elevated CAMP levels in EP,, and EP, . The M&B 28767-stimulated GTPase activity consisted of pertussis-toxin-sensi tive and cholera-toxinsensitive portions in the EP,,-expressing cell membrane, suggested that EP,,, is coupled to both guanine nucleotide-binding inhibitory and stimulatory proteins. These results indicate that EP,,. is coupled to both stimulation and inhibition of adenylate cyclase, but that EP3, and EP,, are exclusively coupled to inhibition of adenylate cyclase. Thus, alternative splicing produces a third isoform with a different carboxy-terminal tail, which differs from the other two isoforms in the specificity of coupling to a signal-transduction pathway.Prostaglandin (PG) E, exhibits a broad range or biological actions in diverse tissues through specific receptors on plasma membranes for maintenance of local homeostasis in the body [l, 21. In the process of the cloning of the two EP, isoforms, we obtained a third isoform, which is also produced through alternative splicing and differs only in the carboxy-terminal tail from the other two isoforms. We now report the cloning and expression of the third EP, isoform. We show that this receptor is coupled to both stimulation and inhibition of adenylate cyclase. This finding will be of help in understanding the diversity of the actions of P G b , and shows the importance of thc carboxy-terminal tail in the specificity of coupling to a second-messenger system.