The Indonesian Throughflow (ITF) is the only open pathway for interocean exchange between the Pacific and Indian Ocean basins at tropical latitudes. A proxy time series of ITF transport variability is developed using remotely sensed altimeter data. The focus is on the three outflow passages of Lombok, Ombai, and Timor that collectively transport the entire ITF into the Indian Ocean, and where direct velocity measurements are available to help ground-truth the transport algorithm. The resulting 18 year proxy time series shows strong interannual ITF variability. Significant trends of increased transport are found in the upper layer of Lombok Strait, and over the full depth in Timor Passage that are likely related to enhanced Pacific trade winds since the early 1990s. The partitioning of the total ITF transport through each of the major outflow passage varies according to the phase of the Indian Ocean Dipole (IOD) or El Niño-Southern Oscillation (ENSO). In general, Pacific ENSO variability is strongest in Timor Passage, most likely through the influence of planetary waves transmitted from the Pacific along the Northwest Australian shelf pathway. Somewhat surprisingly, concurrent El Niño and positive IOD episodes consistently show contradictory results from those composites constructed for purely El Niño episodes. This is particularly evident in Lombok and Ombai Straits, but also at depth in Timor Passage. This suggests that Indian Ocean dynamics likely win out over Pacific Ocean dynamics in gating the transport through the outflow passages during concurrent ENSO and IOD events.

The atmospheric response to the Kuroshio Extension (KE) variability during 1979-2012 is investigated using a KE index derived from sea surface height measurements and an eddy-resolving ocean general circulation model hindcast. When the index is positive, the KE is in the stable state, strengthened and shifted northward, with lower eddy kinetic energy, and the Kuroshio-Oyashio Extension (KOE) region is anomalously warm. The reverse holds when the index is negative. Regression analysis shows that there is a coherent atmospheric response to the decadal KE fluctuations between October and January. The KOE warming generates an upward surface heat flux that leads to local ascending motions and a northeastward shift of the zones of maximum baroclinicity, eddy heat and moisture fluxes, and the storm track. The atmospheric response consists of an equivalent barotropic large-scale signal, with a downstream high and a low over the Arctic. The heating and transient eddy anomalies excite stationary Rossby waves that propagate the signal poleward and eastward. There is a warming typically exceeding 0.6 K at 900 hPa over eastern Asia and western United States, which reduces the snow cover by 4%-6%. One month later, in November-February, a high appears over northwestern Europe, and the hemispheric teleconnection bears some similarity with the Arctic Oscillation. Composite analysis shows that the atmospheric response primarily occurs during the stable state of the KE, while no evidence of a significant large-scale atmospheric response is found in the unstable state. Arguments are given to explain this strong asymmetry.