Floodplains of the southeastern United States exhibit high biological productivity, maintained by periodic floodplain inundation as a result of seasonal flooding. To examine the relationship between biological productivity and seasonal flooding following periods of drought, we quantified aquatic macroinvertebrate communities monthly in an inundated floodplain during the annual flood pulse (December-April) in two years, one following a multi-year drought and one following a larger than average flooding event. We predicted that floodplain communities would differ in richness, biomass, and community composition between years and that differences would be driven by discharge at the main stem and organic matter availability. We collected macroinvertebrates from the floodplain of the Altamaha River, an unimpounded 6th order river in the Coastal Plain region of the southeastern US that experiences floodplain connectivity. With invertebrates identified to genus, we elucidated richness, abundance, biomass, community composition, and functional feeding group. Richness was generally higher in the drought year but decreased throughout the flood pulse, while during the flood year richness was lower and increased. Biomass decreased throughout the flood pulse following the drought year and increased during the flood year. There was a high degree of overlap in invertebrate community composition based on abundance data during both years of the study with collector gatherers being the most highly abundant functional feeding group. As climate change impacts (i.e., severe droughts) become more common, it is critical to investigate how aquatic communities are responding to increasingly unpredictable flow conditions in unimpounded and seemingly unaltered rivers.