Background. Transgenic animal models have had a significant impact on life sciences research, including many areas of immunology. Meticulously characterized inbred mouse strains provide an appropriate genetic background for the production of transgenic mice used in major histocompatibility complex (MHC)-related experiments. Flow cytometry (FACS) with MHC-specificmonoclonal antibodies is considered the method of choice to determine the exact phenotype -MHC class I or class II molecules -of the mice. The high homology between various MHC gene products, however, results in a considerable crossreactivity of the monoclonal antibodies that are usually used for FACS analysis. We established an alternative screening method that reliably determines different MHC class I antigens and allows discrimination of homozygous and heterozygous individuals. Methods. Mice of the strains CS7B1!6 (H_2 b ), B6.C_H_2 bmll (H_2 bmll ), BALB/c (H-2 d ), and BlO.BR (H-2 k ), as well as crosses thereof were used. FACS