A simple and efficient single‐pot synthesis of novel heteroaryl‐substititued benzo[a]pyrimido[5′,4′:5,6]pyrano[2,3‐c]phenazines has been developed via initial Knoevenagel, subsequent Michael, and final heterocyclization reactions of 2‐hydroxynaphthalene‐1,4‐dione, o‐phenylenediamine, aromatic aldehydes, and barbituric acid in the presence of H3PW12O40@nano‐ZnO as a recyclable heterogeneous catalyst in EtOH under microwave irradiation (MWI). This sequential green process with several advantages, such as operational simplicity, high yields, low cost, easy handling, eco‐friendliness and reusability of the catalyst, absence of any tedious work‐up or purification, and avoidance of hazardous or toxic reagents/catalysts/solvents, opens an effective and convenient way to pyrano‐functionalized benzophenazine systems, which are promising compounds for different biomedical applications.