A number of living organisms form mineral phases through a process termed biomineralization. Two end member mechanisms exist depending on the level of biological involvement. The first involves mineral formation without any apparent regulatory control. Termed 'biologically induced biomineralization' by Lowenstam (1981), biominerals form as incidental byproducts of interactions between the organisms and their immediate environment. The minerals that form through this passive process have crystal habits and chemical compositions similar to those produced by precipitation under inorganic conditions. By contrast, 'biologically controlled biomineralization', the subject of Chapter 10, is much more closely regulated, and organisms precipitate minerals that serve physiological and structural roles. This process can include the development of intracellular or epicellular organic matrices into which specific ions are actively introduced and their concentrations regulated such that appropriate mineral saturation states are achieved. Accordingly, minerals can be formed within the organism even when conditions in the bulk solution are thermodynamically unfavourable. In this chapter we focus on the role of bacteria. Specifically, we examine the formation of iron oxyhydroxides and calcium carbonates throughout geological time, and explore how our understanding of modern biomineralization processes is shedding new insights into the evolution of the Earth's hydrosphere-atmosphere-biosphere over long time scales.