The Japanese Rice Genome Research Program.

Sasaki, Takuji; Yano, Masahiro; Kurata, Nori; Yamamoto, Kimiko

doi:10.1101/gr.6.8.661

Cited by 11 publications

(2 citation statements)

References 16 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…To collect all members of the PP2C gene family in rice, all predicted AtPP2C protein sequences were initially used as query sequences to search against the TIGR rice database [ 47 ] using BLASTP. Multiple BLAST searches using protein sequences of significant hits as the queries were then performed in several rice databases, including NCBI [ 69 ], TIGR [ 47 ], Rice Genome Database-japonica of the Rice Genome Research Program [ 83 ] and the International Rice Genome Sequencing Project (IRSGP) [ 84 ]. After removal of redundant sequences from our data set, SMART and Pfam were used to confirm the presence of PP2C catalytic domains as described above.…”

Section: Methodsmentioning

confidence: 99%

Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis

et al. 2008

View full text Add to dashboard Cite

show abstract

Section: Methodsmentioning

confidence: 99%

Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis

et al. 2008

View full text Add to dashboard Cite

show abstract

“…Although this program ultimately aims to clarify the entire rice genome sequence, facilitate achievement of this goal, and increase the genetic tools available for a wide range of applications, the RGP is composed of four main groups: cDNA analysis, genetic mapping, physical mapping, and informatics (2).…”

mentioning

confidence: 99%

The rice genome project in Japan

Sasaki

1998

Proc. Natl. Acad. Sci. U.S.A.

View full text Add to dashboard Cite

Since 1991, the Rice Genome Research Program in Japan has carried out rice genomics, such as largescale cDNA analysis, construction of a fine-scale restriction fragment length polymorphism map, and physical mapping of the rice genome with yeast artificial chromosome clones. These studies have made a great impact on research into grass genomes and made rice a model plant for other cereal crop research. Starting in 1998, the Rice Genome Research Program will step into a new stage of genomics-that of genome sequencing. This project eventually should reveal all of the genomic sequence information in the rice plant and be an indispensable aid in understanding the genomics of other grass species.

show abstract

Genome-Wide RNA Expression Profiling in Rice

Kikuchi

Wang

Rice Functional Genomics

View full text Add to dashboard Cite

The Japanese Rice Genome Research Program.

Cited by 11 publications

References 16 publications

Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis

Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis

The rice genome project in Japan

Genome-Wide RNA Expression Profiling in Rice

Contact Info

Product

Resources

About