Cell-to-cell signaling involving N-acyl-homoserine lactone compounds termed autoinducers (AIs) is instrumental to virulence factor production and biofilm development by Pseudomonas aeruginosa. In order to determine the importance of cell-to-cell signaling during the colonization of mechanically ventilated patients, we collected 442 P. aeruginosa pulmonary isolates from 13 patients. Phenotypic characterization showed that 81% of these isolates produced the AI-dependent virulence factors elastase, protease, and rhamnolipids. We identified nine genotypically distinct P. aeruginosa strains. Six of these strains produced AIs [N-butanoylhomoserine lactone or N-(3-oxo-dodecanoyl)-homoserine lactone] and extracellular virulence factors (elastase, total exoprotease, rhamnolipid, hydrogen cyanide, or pyocyanin) in vitro. Three of the nine strains were defective in the production of both AIs and extracellular virulence factors. Two of these strains had mutational defects in both the lasR and rhlR genes, which encode the N-acyl-homoserine lactone-dependent transcriptional regulators LasR and RhlR, respectively. The third of these AI-deficient strains was only mutated in the lasR gene. Our observations suggest that most, but not all, strains colonizing intubated patients are able to produce virulence factors and that mutations affecting the cell-to-cell signaling circuit are preferentially located in the transcriptional regulator genes.The gram-negative bacterium Pseudomonas aeruginosa is a major nosocomial pathogen responsible for severe pulmonary infections in mechanically ventilated patients, a complication associated with high mortality and excessive hospital costs (7,27). Among ventilator-associated pneumonia (VAP) caused by P. aeruginosa, 95% of cases are preceded by colonization of the respiratory tract, a well-recognized risk factor for pulmonary infection (20). The risk of colonization of intubated patients by P. aeruginosa is directly linked to the presence of the endotracheal intubation device and increases with the duration of intubation (29).P. aeruginosa regulates the production of several extracellular virulence factors by at least two cell-to-cell signaling systems, called lasRI and rhlRI (60). This circuit is organized in a hierarchical cascade in which the lasRI system is required for full expression of the rhlRI system (28). Accumulation of the two autoinducers (AIs) N-(3-oxododecanoyl)-homoserine lactone (3-oxo-C 12 -HSL) (39) and N-butanoyl-homoserine lactone (C 4 -HSL) (40), the products of the LasI and RhlI enzymes, respectively, allows the bacteria to sense their own cell density (17) in order to coordinate the production of virulence factors (9, 38, 60). As a result, the secretion of extracellular virulence factors such as elastase increases strongly once a threshold bacterial cell density has been reached (38). This