“…There is a long‐history of lower atmosphere data assimilation (Gelaro et al., 2017; Hersbach et al., 2020; Rienecker et al., 2011), but the whole atmosphere system data assimilation is relatively new. There have been significant developments in the assimilation of thermosphere‐ionosphere observations such as, neutral density (Matsuo et al., 2013; Mehta et al., 2018; M. V. Codrescu et al., 2004; Ren & Lei, 2020; S. M. Codrescu et al., 2018; Sutton, 2018), thermospheric temperature (Laskar, Pedatella, et al., 2021), thermospheric airglow radiance (Cantrall et al., 2019), and electron content (Aa et al., 2016; Bust et al., 2004; Bust & Immel, 2020; Chen et al., 2016; Datta‐Barua et al., 2013; Forsythe et al., 2021; He et al., 2020; Kodikara et al., 2021; Lee et al., 2012; Lin et al., 2015; Matsuo et al., 2013; Pedatella et al., 2020; Song et al., 2021). While these results were promising and showed that the assimilation of TI observations improves the model states, most were limited to using upper atmosphere only models or used limited thermospheric datasets from low‐earth‐orbit satellites or ionospheric only measurements or observing system simulation experiments.…”