2020
DOI: 10.3390/cancers12092426
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Systems Biology Approach Identifies Prognostic Signatures of Poor Overall Survival and Guides the Prioritization of Novel BET-CHK1 Combination Therapy for Osteosarcoma

Abstract: Osteosarcoma (OS) patients exhibit poor overall survival, partly due to copy number variations (CNVs) resulting in dysregulated gene expression and therapeutic resistance. To identify actionable prognostic signatures of poor overall survival, we employed a systems biology approach using public databases to integrate CNVs, gene expression, and survival outcomes in pediatric, adolescent, and young adult OS patients. Chromosome 8 was a hotspot for poor prognostic signatures. The MYC-RAD21 copy number gain (8q24) … Show more

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Cited by 12 publications
(5 citation statements)
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References 109 publications
(189 reference statements)
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“…In multiple preclinical models of pediatric cancer, CHK1 inhibitor monotherapy was considered sufficient to overcome innate resistance or prevent acquired resistance. In OS, the therapy targeting CHK1, whether monotherapy or synergistic therapy, is regarded as a feasible strategy to overcome the difficulties encountered with chemotherapy (Heidler et al 2020 ; Pandya, et al 2020 ). In this study, after treatment with HMA, downregulated MYC decreased CHK1 expression at the transcriptional level, resulting in the inhibition of the RAD51-mediated homologous recombination process.…”
Section: Discussionmentioning
confidence: 99%
“…In multiple preclinical models of pediatric cancer, CHK1 inhibitor monotherapy was considered sufficient to overcome innate resistance or prevent acquired resistance. In OS, the therapy targeting CHK1, whether monotherapy or synergistic therapy, is regarded as a feasible strategy to overcome the difficulties encountered with chemotherapy (Heidler et al 2020 ; Pandya, et al 2020 ). In this study, after treatment with HMA, downregulated MYC decreased CHK1 expression at the transcriptional level, resulting in the inhibition of the RAD51-mediated homologous recombination process.…”
Section: Discussionmentioning
confidence: 99%
“…MG63 and U2OS human OS cell lines (#86051601-1VL and #92022711-1VL, Sigma, St Louis, MO, USA), and a patient-derived xenograft (PDX) TT2-77 xenoline were grown in DMEM ( Pandya et al, 2020 ). Human MSCs (#PT-2501, Lonza, Basel, Switzerland) and human aMSCs (#SCC038, Sigma) were grown in MSCBM (#PT-3238, Lonza).…”
Section: Methodsmentioning
confidence: 99%
“…MG63 and U2OS human OS cell lines (#86051601-1VL and #92022711-1VL, Sigma, St. Louis, MO, USA), and a patient-derived xenograft (PDX) TT2-77 xenoline were grown in DMEM (Pandya et al, 2020). Human mesenchymal stem cells (MSCs) (#PT-2501, Lonza, Basel, Switzerland) and human adipose-derived MSCs (#SCC038, Sigma) were grown in MSCBM (#PT-3238, Lonza).…”
Section: Methodsmentioning
confidence: 99%