Products of the mitochondrial protein-synthesizing system have been labeled in vivo in the presence of cycloheximide in microaerobic cells and in cells from glucose-limited and glucose-repressed aerobic continuous cultures of Saccharomyces cerevisiae. Lipophilic proteins were extracted from labeled mitochondrial membranes with aqueous methanol and neutral and acidic chloroformmethanol solvents. In glucose-limited aerobic and microaerobic cells, about half of the total mitochondrial products were soluble in organic solvents; in contrast, almost all of the labeled products were extracted from glucose-repressed mitochondria. Only trace amounts of labeled product were formed in mitochondrial membranes of a petite mutant. Lipophilic proteins were examined by polyacrylamide gel electrophoresis under dissociating conditions. Most of the label was associated with components of apparent molecular weights 12,000, 14,000 and 16,000. The relative proportions of these species in mitochondrial membranes are dependent on the concentrations of oxygen and glucose in which the cells are grown.Recent studies have confirmed that products of both the cytoplasmic and mitochondrial protein-synthesizing systems are required for the assembly of some complexes of the inner membrane of yeast mitochondria, e.g., cytochrome c oxidase (4, 10, 20) and adenosine triphosphatase (18,20). A significant proportion of the mitochondrial protein products can be extracted selectively from rat liver (1, 6-9) and yeast (13, 19) mitochondria with organic solvents. Kadenbach and Hadvary (7), Sierra and Tzagoloff (17), and Michel and Neupert (12) have discussed the possible role of small lipophilic molecules in the synthesis and assembly of mitochondrial membranes. Previous studies showed that the nature of the membrane proteins made by the mitochondria in Saccharomyces cerevisiae is regulated by environmental factors such as oxygen tension and glucose concentration (5,11,15). Whether this control extends to the synthesis of the lipophilic proteins and, therefore, reflects fundamental changes in mitochondrial membrane structure is the subject of this communication.MATERIALS AND METHODS Cell culture. A diploid strain of S. cerevisiae and a petite cell derived from the parent strain by euflavine treatment were studied. Cells were grown in continuous cultures in a New Brunswick Microferm, fitted with pH and oxygen controls, on a semisynthetic medium (16) at pH 5.5 with a dilution rate of 0.06/h. Labeling, extraction, and electrophoresis of lipophilic proteins from mitochondria. The protein products synthesized by the mitochondria were labeled in vivo with [4, 5-3H]leucine as described previously (15). The concentration of tritiated leucine used during the labeling period was varied in some experiments and is referred to in the legends.Lipophilic proteins were extracted essentially by the method of Tzagoloff and Akai (19). Pellets of submitochondrial particles were extracted twice with methanol (90%, vol/vol) at room temperature (1 ml of solvent per 2 mAg of mi...