Abstract:Mitochondrial networks in cardiac myocytes under oxidative stress show collective (cluster) behavior through synchronization of their inner membrane potentials (ΔΨ m ). However, it is unclear whether the oscillation frequency and coupling strength between individual mitochondria affect the size of the cluster and vice versa. We used the wavelet transform and developed advanced signal processing tools that allowed us to capture individual mitochondrial ΔΨ m oscillations in cardiac myocytes and examine their dyn… Show more
“…Locally, at the level of individual mitochondria, CO 2 production fluctuates as a result of oscillating mitochondrial activity (8) regulated by Ca 2+ transients (9)(10)(11) and redox state (12,13). CO 2 vents out of the mitochondrial matrix, across the cytoplasm, and into the extracellular space, crossing at least three membranes (including two mitochondrial membranes plus the sarcolemma) and a distance of several microns which varies as a result of heterogeneous (14) and time-dependent capillary perfusion (15).…”
CO
2
is produced abundantly by cardiac mitochondria. Thus an efficient means for its venting is required to support metabolism. Carbonic anhydrase (CA) enzymes, expressed at various sites in ventricular myocytes, may affect mitochondrial CO
2
clearance by catalyzing CO
2
hydration (to H
+
and HCO
3
−
), thereby changing the gradient for CO
2
venting. Using fluorescent dyes to measure changes in pH arising from the intracellular hydration of extracellularly supplied CO
2
, overall CA activity in the cytoplasm of isolated ventricular myocytes was found to be modest (2.7-fold above spontaneous kinetics). Experiments on ventricular mitochondria demonstrated negligible intramitochondrial CA activity. CA activity was also investigated in intact hearts by
13
C magnetic resonance spectroscopy from the rate of H
13
CO
3
−
production from
13
CO
2
released specifically from mitochondria by pyruvate dehydrogenase-mediated metabolism of hyperpolarized [1-
13
C]pyruvate. CA activity measured upon [1-
13
C]pyruvate infusion was fourfold higher than the cytoplasm-averaged value. A fluorescent CA ligand colocalized with a mitochondrial marker, indicating that mitochondria are near a CA-rich domain. Based on immunoreactivity, this domain comprises the nominally cytoplasmic CA isoform CAII and sarcoplasmic reticulum-associated CAXIV. Inhibition of extramitochondrial CA activity acidified the matrix (as determined by fluorescence measurements in permeabilized myocytes and isolated mitochondria), impaired cardiac energetics (indexed by the phosphocreatine-to-ATP ratio measured by
31
P magnetic resonance spectroscopy of perfused hearts), and reduced contractility (as measured from the pressure developed in perfused hearts). These data provide evidence for a functional domain of high CA activity around mitochondria to support CO
2
venting, particularly during elevated and fluctuating respiratory activity. Aberrant distribution of CA activity therefore may reduce the heart’s energetic efficiency.
“…Locally, at the level of individual mitochondria, CO 2 production fluctuates as a result of oscillating mitochondrial activity (8) regulated by Ca 2+ transients (9)(10)(11) and redox state (12,13). CO 2 vents out of the mitochondrial matrix, across the cytoplasm, and into the extracellular space, crossing at least three membranes (including two mitochondrial membranes plus the sarcolemma) and a distance of several microns which varies as a result of heterogeneous (14) and time-dependent capillary perfusion (15).…”
CO
2
is produced abundantly by cardiac mitochondria. Thus an efficient means for its venting is required to support metabolism. Carbonic anhydrase (CA) enzymes, expressed at various sites in ventricular myocytes, may affect mitochondrial CO
2
clearance by catalyzing CO
2
hydration (to H
+
and HCO
3
−
), thereby changing the gradient for CO
2
venting. Using fluorescent dyes to measure changes in pH arising from the intracellular hydration of extracellularly supplied CO
2
, overall CA activity in the cytoplasm of isolated ventricular myocytes was found to be modest (2.7-fold above spontaneous kinetics). Experiments on ventricular mitochondria demonstrated negligible intramitochondrial CA activity. CA activity was also investigated in intact hearts by
13
C magnetic resonance spectroscopy from the rate of H
13
CO
3
−
production from
13
CO
2
released specifically from mitochondria by pyruvate dehydrogenase-mediated metabolism of hyperpolarized [1-
13
C]pyruvate. CA activity measured upon [1-
13
C]pyruvate infusion was fourfold higher than the cytoplasm-averaged value. A fluorescent CA ligand colocalized with a mitochondrial marker, indicating that mitochondria are near a CA-rich domain. Based on immunoreactivity, this domain comprises the nominally cytoplasmic CA isoform CAII and sarcoplasmic reticulum-associated CAXIV. Inhibition of extramitochondrial CA activity acidified the matrix (as determined by fluorescence measurements in permeabilized myocytes and isolated mitochondria), impaired cardiac energetics (indexed by the phosphocreatine-to-ATP ratio measured by
31
P magnetic resonance spectroscopy of perfused hearts), and reduced contractility (as measured from the pressure developed in perfused hearts). These data provide evidence for a functional domain of high CA activity around mitochondria to support CO
2
venting, particularly during elevated and fluctuating respiratory activity. Aberrant distribution of CA activity therefore may reduce the heart’s energetic efficiency.
“…10). These m fluctuations developed into actively propagating waves of mitochondrial depolarization/ collapse (velocity ¾20 µm s 1 , similar to those described in cells) [98,102] across the epicardial surface (4 mm 2 area with cellular spatial resolution) [109]. Complex spatiotemporal gradients of m during metabolic stress produced by ischemic injury could be also visualized in hearts exhibiting left ventricular hypertrophy (LVH) [110].…”
Section: Emergent Phenomena In Network At (Sub) Cellular Tissue Anmentioning
confidence: 89%
“…The other two evident oscillation periods are ¾40 min (circahoralian bursts) and ¾4 min; (b) Depicted is the corresponding logarithmic absolute squared wavelet transform over logarithmic frequency and time. As a form of time-frequency representation, the wavelet transform expands signals in terms of wavelets by breaking the signal down into different scale components [102]. At any time, the wavelet transform uncovers the predominant frequencies: there are periodically recurring frequency contents at about 3.1-10 mHz ( 2.5 to 2.0 on the logarithmic frequency scale, light blue: corresponding to the few min period range) and at about 0.1-1 mHz ( 4 to 3 on the logarithmic frequency scale, yellow: corresponding to the circahoralian range).…”
Section: Chaos Multi-oscillatory Systems and Inverse Power Lawsmentioning
confidence: 99%
“…The boxes and arrows show the correspondence between the time series and the wavelet plot. Wavelet analysis was carried out using the Morlet wavelet with wavelet software in Matlab v7.1.0.246 (R14), as described previously [102]. The figure and wavelet analysis were provided courtesy of Dr F. T. Kurz, affiliated with Charité Universitätsmedizin, Berlin, Germany, and Massachusetts General Hospital, Charlestown, USA.…”
Section: Chaos Multi-oscillatory Systems and Inverse Power Lawsmentioning
“…The top-down approach involves the integrated study of different sort of networks, and their simulation with computational models [7,8]. Bottom-up approaches include the study of selected processes in cells, organs, or organisms, at high spatio-temporal resolution, which can also be simulated through computational modeling [9][10][11][12][13][14][15][16]. From improving the production of a high-value metabolite or polymer in unicellular eukaryotes or prokaryotes, to the understanding of the pathophysiology of a disease, the focus can be placed on single mechanistic pathways such as amino acids or sympathetic signaling in cardiovascular disease, or a global study of a large number of molecules and then dissecting the individual pathways involved [3].…”
Abstract:The advent of high throughput -omics has made the accumulation of comprehensive data sets possible, consisting of changes in genes, transcripts, proteins and metabolites. Systems biology-inspired computational methods for translating metabolomics data into fluxomics provide a direct functional, dynamic readout of metabolic networks. When combined with appropriate experimental design, these methods deliver insightful knowledge about cellular function under diverse conditions. The use of computational models accounting for detailed kinetics and regulatory mechanisms allow us to unravel the control and regulatory properties of the fluxome under steady and time-dependent behaviors. This approach extends the analysis of complex systems from description to prediction, including control of complex dynamic behavior ranging from biological rhythms to catastrophic lethal arrhythmias. The powerful quantitative metabolomics-fluxomics approach will help our ability to engineer unicellular and multicellular organisms evolve from trial-and-error to a more predictable process, and from cells to organ and organisms.
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