Magnetic field is widely used in the separation of magnetic nanoparticles. 1,2 The magnetic separation is a result of magnetophoresis where various forces by magnetic field gradient, viscous drag, sedimentation, and interactions of magnetic dipoles are involved. 3,4 Magnetic nanoparticles usually agglomerate reversibly under magnetic field. Magnetophoretic transport demonstrates the possibilities of the biomedical applications such as intercellular manipulation of magnetic nanoparticles for imaging or drug delivery. 5-7 Magnetization of ferrofluid occurs by Neel and Brownian mechanism 5 and aggregation of nanoparticles. 8 We have recently reported the magnetization of magnetite ferrofluid studied by measuring the change of magnetic weight. 9 As the magnetic nanoparticles agglomerate and the structural relaxation occurs to form stable aggregates, the magnetic weight increases with the stretched exponential time dependence, m(t) = m(∞) + [m(0) − m(∞)] exp[−(t/τ) β ] where the exponent β is a positive constant less than one and τ is the characteristic time constant. The stretched exponential function H(t) = exp[−(t/τ) β ] results from the distribution of the energy barriers. 10,11 In our case, the formation of stable aggregates is considered to have different activation energies depending on the shape, size, and packing geometry of aggregates. The stretched exponential behaviors have been observed for the samples of different concentrations under various magnetic fields. When we study the transmission change of the fluid as like in Refs 2 and 12, the single or double exponential decay is observed, which suggests that the particle movement in the fluid is affected by diffusion but the structural relaxations of aggregates cause the stretched exponential dynamics. 13