Toll-like receptors (TLRs) are key components of the immune system that detect microbial infection and trigger antimicrobial host defense responses. TLR5 is a sensor for monomeric flagellin, which is a component of bacterial flagella known to be a virulence factor. In this study we generated TLR5-deficient mice and investigated the role of TLR5 signaling in the detection of flagellin and antibacterial immune responses to Salmonella typhimurium and Pseudomonas aeruginosa. We found that TLR5 is essential for the recognition of bacterial flagellin both in vivo and ex vivo. TLR5 contribution to antibacterial host response to i.p. infection with S. typhimurium or intranasal administration of P. aeruginosa may be masked by TLR4 or other sensing mechanisms. By using radiation bone marrow chimera, we showed that upon i.p. injection of flagellin immune responses are mediated by lymphoid cells, whereas resident cells are required for the initiation of response upon intranasal flagellin administration. These results suggest that flagellin recognition in different organs is mediated by distinct TLR5-expressing cells and provide insights into the cooperation of the TLR5 and TLR4 signaling pathways used by the innate immune system in the recognition of bacterial pathogens.bacterial infection ͉ flagellin R ecognition of microbial infection and initiation of immune response are controlled by multiple mechanisms. Toll-like receptors (TLRs) have recently emerged as key components of the innate immune system that recognize common molecular structures detected in certain groups of microorganisms and trigger the activation of adaptive immunity (1). Each TLR detects specific microbial components. For example, TLR4 recognizes LPS, TLR2 recognizes bacterial lipoproteins and lipoteichoic acid, and TLR3 recognizes viral double-stranded RNA. All TLRs share a common intracellular domain, the Toll-IL-1 receptor homology domain, and upon activation initiate signaling cascades that lead to common responses such as the induction of inflammatory cytokines and up-regulation of costimulatory molecules. Moreover, TLRs also have specific functions as exemplified by their different ability to induce type I IFN (1). Thus, TLRs activate multiple steps in the inflammatory reactions that help to eliminate the invading pathogens and coordinate systemic defenses.Among TLRs, TLR5 is the receptor for flagellin, the major constituent of bacterial flagella and a virulence factor for Gramnegative and Gram-positive bacteria (2, 3). TLR5 engagement by bacterial flagellin activates the MyD88-dependent signaling pathway, which leads to the nuclear translocation of NF-B and the activation of the MAPKs, ultimately inducing the maturation of antigen-presenting cells and the secretion of proinflammatory cytokines and chemokines (4-8). TLR5 is expressed by a variety of cells including monocytes, dendritic cells (DCs), epithelial cells, and mast cells (5, 9-13). Interestingly, TLR5 is expressed on the basolateral side of intestinal epithelial cells, which are chronicall...