A disaccharide containing GlcN and 3-deoxy-D-manno-2-octu~osonic acid (Kdo) was detected after acidic methanolysis and peracetylation of hydrofluoric-acid-treated smooth-type and roughtype lipopolysaccharide of Pectinatus cerevisiiphilus and Pectinatus frisingensis, which are strictly anaerobic bacteria capable of growing in packaged beer. The disaccharide was also found in alkalitreated lipopolysaccharide, but was not directly detectable from intact lipopolysaccharide. This suggested that the disaccharide carried a phosphate residue. The position of this phosphate was shown, by GLCMS of appropriately degraded and derivatized samples, to be 0 6 of the GlcN. Methylation analysis of the purified disaccharide revealed that GlcN was linked to position 4 of Kdo. The acetylated derivative of the disaccharide was isolated in pure form, and, by 'H-NMR and I3C-NMR spectroscopy, it was confirmed to possess the structure a-~-GlcpN-(1'+4)-Kdo. In the lipopolysaccharide the amino group of GlcN is free.The Gram-negative bacterial genus Pectinatus contains two species, I? cerevisiiphilus and I? frisingensis. Both species are strict anaerobes, and they occur as contaminants and spoilage organisms in packaged beer [ 1, 21. The cell-surface lipopolysaccharides of the type strains of Pectinatus were recently reported to possess exceptional heterogeneity, and in fact two distinct lipopolysaccharide populations could be extracted from both species [3]. One of these lipopolysaccharides was of low-molecular-mass (rough, R) type, whereas the other contained additional sugar chains resembling smooth ( S ) lipopolysaccharide. Chemical characterization of the lipopolysaccharides indicated possible differences in the core oligosaccharide regions of the R and S type, particularly in the substitution of the 3-deoxyoctulosonic-acid region.These findings prompted us to structurally study the core region of Pectinatus lipopolysaccharides. In the present communication we describe a novel saccharide structure in the lipopolysaccharides of Pectinatus. This saccharide consists of a 3-deoxy-D-manno-2-octulosonic acid (Kdo) carrying at its position 4 an a-pyranosidic GlcN, which is substituted at position 6' by phosphate.
MATERIALS AND METHODS
Reference compoundsMethyl 2-acetarnido-3,4,6-triri-O-acetyl-2-deoxy-a-~-glucopyranoside was prepared from methyl 2-acetamido-2-de- oxy-a-D-glucopyranoside (a-D-GlcpNAc-OMe, Sigma) by standard derivatization (peracetylation) and purification (silica gel HPLC) procedures. Methyl (methyl 4,5,7,8-tetra-O-acetyl-3-deoxy-a-~-manno-2-octulopyranos~d)onate (aKdop-OMe methyl ester) was kindly provided by Prof. Paul Kosma, Universitat fur Bodenkultur, Vienna, Austria.
Lipopoly saccharidesLipopolysaccharides were extracted from P. cerevisiiphilus ATCC 29359= and I? frisingensis ATCC 33332T by the phenol/chloroform/petroleum-ether method (5 : 5 :8, by vol. modification [4]) as described previously [3]. By sequential precipitations with water and acetone, R-type and S-type lipopolysaccharides, respectively, were obtained fr...