The free radicals produced during the long-term operation of fuel cells can accelerate the chemical degradation of the proton exchange membrane (PEM). In the present work, the widely used free radical scavenger CeO 2 was anchored on aminofunctionalized metal−organic frameworks, and flexible alkyl sulfonic acid side chains were tethered onto the surface of inorganic nanoparticles. The prepared CeO 2 -anchored bifunctionalized metal−organic framework (CeO 2 -MNCS) was used as a promising synergistic filler to modify the Nafion matrix for addressing the detrimental effect of pristine CeO 2 on the performance and durability of PEMs, including decreased proton conductivity and the migration problem of CeO 2 . The obtained hybrid membranes exhibited a high proton conductivity up to 0.239 S cm −1 , enabling them to achieve a high power density of 591.47 mW cm −2 in a H 2 /air PEMFC single cell, almost 1.59 times higher than that of recast Nafion. After 115 h of acceleration testing, the OCV decay ratio of the hybrid membrane was decreased to 0.54 mV h −1 , which was significantly lower than that of recast Nafion (2.18 mV h −1 ). The hybrid membrane still maintained high power density, low hydrogen crossover, and unabated catalytic activity of the catalyst layer after the durability test. This study provides an effective one-stone-two-birds strategy to develop highly durable PEMs by immobilizing CeO 2 without sacrificing proton conductivity, allowing for the realization of improvement on the performance and sustained durability of PEMFC simultaneously.