We demonstrate a low-temperature reduction method for exhibiting fine control over the oxidation state of substitutional Mn ions in strontium titanate (SrTiO
3
) bulk powder. We employ NaBH
4
as the chemical reductant that causes significant changes in the oxidation state and oxygen vacancy complexation with Mn
2+
dopants at temperatures <350°C where lattice reduction is negligible. At higher reduction temperatures, we also observe the formation of Ti
3+
in the lattice by diffuse-reflectance and low-temperature electron paramagnetic resonance (EPR) spectroscopy. In addition to Mn
2+
, Mn
4+
, and the Mn
2+
complex with an oxygen vacancy, we also observe a sharp resonance in the EPR spectrum of heavily reduced Mn-doped SrTiO
3
. This sharp signal is tentatively assigned to surface superoxide ion that is formed by the surface electron transfer reaction between Ti
3+
and O
2
. The ability to control the relative amounts of various paramagnetic defects in SrTiO
3
provides many possibilities to study in a model system the impact of tunable dopant-defect interactions for spin-based electronic applications or visible-light photocatalysis.