Irradiation of cuprate high-T c superconductors with light ions of moderate energy creates point defects that lead to a reduction or full suppression of the critical temperature. By shaping the ion flux with a stencil mask, nanostructures for emerging superconducting electronics can be fabricated. The 3-dimensional shape of such defect landscapes is examined, based on calculations of full collision cascades and atom displacements. A relation between the calculated defect density and experimental values of the critical temperature T c in thin YBa 2 Cu 3 O 7−δ films is etablished that allows to determine the distribution of local T c 's and its 3-dimensional visualization. The results confirm that, using 75 keV He + ion irradiation and a stencil mask, well-defined patterns of non-superconducting material in the superconducting matrix can be produced with low blurring.