We report a method for isolating homogeneous myomesin from mammalian skeletal muscle. The identity of the purified bovine protein was confirmed by its reactivity with myomesin-specific monoclonal antibodies and with polyclonal antibodies raised against peptides derived from the amino-terminal and carboxy-terminal ends of the sequence predicted by the human myomesin cDNA. All partial sequences obtained from bovine myomesin can be aligned along the human sequence predicted by its cloned cDNA. Electron microscopy of myomesin revealed short flexible rods with a molecular length of about SO nm. Circular dichroism spectra showed a high degree of structure as expected for a member of the immunoglobulin superfamily of proteins. Alignment of the sequences of the class I and I1 domains of myomesin with the sequences of domains of known three-dimensional structure provides a more detailed model of myomesin. In agreement with this view, the cleavage sites observed by limited proteolysis locate primarily between individual domains.In a solid-phase overlay assay myomesin specifically bound to the myosin rod and to light meromyosin (LMM), but not to the carboxy-terminal 30-kDa fragment of LMM. The myosin-binding site seemed to be confined to the amino-terminal 240 residues of the molecule. The cross-reactivity of myomesin with the phosphorylation-dependent monoclonal neurofilament antibody NE14 [Shaw, G. E., Debus, E. & Keywords: myomesin ; sarcomeric M band ; myosin-binding protein ; titin-associated protein.Vertebrate striated muscle sarcomeres contain in addition to thick and thin filaments a complex cytoskeleton (see [2] and references therein). This cytoskeleton is primarily based on the giant protein titin (also called connectin). In the M band region of the sarcomere, titin seems to be associated with M-protein and myomesin [3, 41. While M-protein was purified and biochemically characterized rather early [5, 61, myomesin was only identified by mAb 171. These antibodies helped to establish differential tissue distributions, and also indicated distinct developmental expression patterns [&lo]. Thus myomesin seemed to be present in all cardiac and skeletal muscle fibres examined, while M-protein was found only in fast skeletal and cardiac fibres.cDNA cloning revealed that both M-protein and myomesin are primarily comprised of repeating immunoglobulin cII-like and fibronectin-type-111-like domains [4, 111. The order of these domains is the same in both proteins and the overall sequence identity is about SO% [4]. This striking similarity implies that