2016
DOI: 10.1099/ijsem.0.000692
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Pyruvatibacter mobilis gen. nov., sp. nov., a marine bacterium from the culture broth of Picochlorum sp. 122

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Cited by 14 publications
(2 citation statements)
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References 27 publications
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“…As such, we relied on CFU counts, which avoid many of these difficulties but at the cost of media selectivity, as highlighted by the discrepancy between absence of CFUs in marine media and amplicon sequencing-based detection of some bacterial taxa. Literature perusal suggests that the most prevalent bacterial taxa detected in gnotobiotic anemones using sequencing (OTU0002, OTU0003, and OTU0006) cannot grow on our employed media and therefore escape CFU counting (Brooijmans et al, 2009;Yetti et al, 2015;Wang et al, 2016). Nevertheless, the antibiotic-treated anemones were highly bacteria depleted as more than 95% of the sequencing reads represented only three OTUs, which correspond to less than 5% of the active taxa detected in control anemones.…”
Section: Discussionmentioning
confidence: 94%
“…As such, we relied on CFU counts, which avoid many of these difficulties but at the cost of media selectivity, as highlighted by the discrepancy between absence of CFUs in marine media and amplicon sequencing-based detection of some bacterial taxa. Literature perusal suggests that the most prevalent bacterial taxa detected in gnotobiotic anemones using sequencing (OTU0002, OTU0003, and OTU0006) cannot grow on our employed media and therefore escape CFU counting (Brooijmans et al, 2009;Yetti et al, 2015;Wang et al, 2016). Nevertheless, the antibiotic-treated anemones were highly bacteria depleted as more than 95% of the sequencing reads represented only three OTUs, which correspond to less than 5% of the active taxa detected in control anemones.…”
Section: Discussionmentioning
confidence: 94%
“…Attached and free-living communities were dominated by 16 genera (Fig. 2b), many of which are commonly being observed in algal cultures or as epibionts in several phycospheres of dinoflagellates, diatoms, and coccolithophores (Foster et al, 2011;Wang et al, 2016).…”
Section: Composition Of Associated Bacterial Communities and Hydrocar...mentioning
confidence: 99%