Several self-compatible species of higher plants, such as Arabidopsis thaliana, have recently been found to contain S-like RNases. These S-like RNases are homologous to the S-RNases that have been hypothesized to control selfincompatibility in Solanaceous species. However, the relationship of the S-like RNases to the S-RNases is unknown, and their roles in self-compatible plants are not understood. To address these questions, we have investigated the RNS2 gene, which encodes an S-like RNase (RNS2) of Arabidopsis. Amino acid sequence comparisons indicate that RNS2 and other S-like RNases make up a subclass within an RNase superfamily, which is distinct from the subclass formed by the S-RNases. RNS2 is most similar to RNase LE [Jost, W., Bak, H., Glund, K., Terpstra, P., Beintema, J. J. (1991) Eur. J. Biochem. 198,[1][2][3][4][5][6], an S-like RNase from Lycopersicon esculentum, a Solanaceous species. The fact that RNase LE is more similar to RNS2 than to the S-RNases from other Solanaceous plants indicates that the S-like RNases diverged from the S-RNases prior to speciation. Like the S-RNase genes, RNS2 is most highly expressed in flowers, but unlike the S-RNase genes, RNS2 is also expressed in roots, stems, and leaves of Arabidopsis. Moreover, the expression of RNS2 is increased in both leaves and petals of Arabidopsis during senescence. Phosphate starvation can also induce the expression ofRNS2. On the basis of these observations, we suggest that one role of RNS2 in Arabidopsis may be to remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.Fundamental insights into the relationship between protein structure and function and gene evolution have been gained from the study of members of the pancreatic RNase superfamily typified by RNase A (1). Another RNase family has recently been identified in the plant kingdom (2). RNases in this family are not homologous to the pancreatic RNase superfamily but rather share homology with a class of fungal RNases that includes RNase T2 ofAspergillus oryzae (3). The plant members of this family include the S-RNases, proteins associated with a self-recognition response known as selfincompatibility (SI) in certain species of higher plants. In Nicotiana alata and other members of the Solanaceae, pollen carrying a particular allele at the S locus, which controls SI, are unable to fertilize plants carrying the same S allele. The mechanism by which S-RNases may participate in the rejection of incompatible pollen is unknown; however, their genes cosegregate with the S locus (4).Initially it seemed plausible that the S-RNases were highly specialized polymorphic enzymes, without homologs in selfcompatible species. However, several recent studies have shown that this is not the case. Among these are dataThe publication costs of this article were defrayed in part by page charge payment. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. §1734 solely to indicate this fact.obtained from PCR experiments perform...