Infectious hematopoietic necrosis virus (IHNV) is a well known rhabdoviral pathogen of salmonid fish in North America that has become established in Asia and Europe. On the Pacific coast of Russia, IHNV was first detected in hatchery sockeye from the Kamchatka Peninsula in 2001. Results of virological examinations of over 10 000 wild and cultured salmonid fish from Kamchatka during 1996 to 2005 revealed IHNV in several sockeye salmon Oncorhynchus nerka populations. The virus was isolated from spawning adults and from juveniles undergoing epidemics in both hatchery and wild sockeye populations from the Bolshaya watershed. No virus was detected in 2 other watersheds, or in species other than sockeye salmon. Genetic typing of 8 virus isolates by sequence analysis of partial glycoprotein and nucleocapsid genes revealed that they were genetically homogeneous and fell within the U genogroup of IHNV. In phylogenetic analyses, the Russian IHNV sequences were indistinguishable from the sequences of North American U genogroup isolates that occur throughout Alaska, British Columbia, Washington, and Oregon. The high similarity, and in some cases identity, between Russian and North American IHNV isolates suggests virus transmission or exposure to a common viral reservoir in the North Pacific Ocean.
KEY WORDS: Fish virus · IHNV · Sockeye salmon · Russia · Virus typing · Rhabdovirus · Infectious hematopoietic necrosis virus
Resale or republication not permitted without written consent of the publisherDis Aquat Org 75: [1][2][3][4][5][6][7][8][9][10][11] 2007 near the 5' end of the viral nucleocapsid (N) gene . A set of 37 North American IHNV isolates has been selected to represent all genogroups and sub-genogroups currently known, and their midG and 5'N sequences comprise the GB37 data set for IHNV phylogenetic analyses .Although originally endemic to North America, IHN also occurs in Asia and Europe, where it is thought to have been spread during the 1960s and 1980s, respectively, via transport of infected fish eggs or fry from North America (Sano et al. 1977, Bovo et al. 1987. In Russia, IHN was confirmed from rainbow trout in an experimental hatchery near Moscow in 2000 (I. Shchelkunov pers. comm.). This virus had never been detected on the Pacific coast of Russia until it was isolated among adult sockeye salmon on the Kamchatka Peninsula in 2001 (Rudakova & Bochkova 2005). In Kamchatka, 5 fish hatcheries rear several species of Pacific salmon for release into rivers and streams. This report describes virological testing, IHNV isolations, and the first genetic characterizations of IHNV from cultured and wild Pacific salmon in Eastern Russia.
MATERIALS AND METHODS
Virological sampling and diagnosis of IHNV.A total of 7697 cultured and 2933 wild salmonid fish from Kamchatka were examined during 1996 to 2005 (Tables 1 & 2). Fish species sampled were Salvelinus malma and Pacific salmon Oncorhynchus spp.: sockeye salmon O. nerka, chum salmon O. keta, pink salmon O. gorbuscha, chinook salmon O. tschawytscha, and coho...