2017
DOI: 10.1039/c6an01902a
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PALMA, an improved algorithm for DOSY signal processing

Abstract: NMR is a tool of choice for the measurement of diffusion coefficients of species in solution. The DOSY experiment, a 2D implementation of this measurement, has been proven to be particularly useful for the study of complex mixtures, molecular interactions, polymers, etc. However, DOSY data analysis requires to resort to the inverse Laplace transform, in particular for polydisperse samples. This is a known difficult numerical task for which we present here a novel approach. A new algorithm based on a splitting … Show more

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Cited by 28 publications
(28 citation statements)
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“…Here, we propose to make use of the parallel proximal algorithm (PPXA) from Pustelnik et al (2011) (see also Cherni et al (2017) for its application in the context of biochemistry). In this algorithm, we solve for X, by taking a proxy variable for each of the terms in (1) Combettes and Pesquet (2011) and an extra proxy variable X 3 to ensure that the predicted scores are in range [0,1].…”
Section: Proposed Algorithmmentioning
confidence: 99%
“…Here, we propose to make use of the parallel proximal algorithm (PPXA) from Pustelnik et al (2011) (see also Cherni et al (2017) for its application in the context of biochemistry). In this algorithm, we solve for X, by taking a proxy variable for each of the terms in (1) Combettes and Pesquet (2011) and an extra proxy variable X 3 to ensure that the predicted scores are in range [0,1].…”
Section: Proposed Algorithmmentioning
confidence: 99%
“…was proposed in [13,14] as a sparsity promoting penalty in the NMR context. In this paper, we propose to resolve Eq.…”
Section: Regularization Functionmentioning
confidence: 99%
“…We apply Algorithm 1 with the different updates proposed in Section 3 (Eq. (11) to (14)) to estimate the 4 sources from the 5 mixtures. The performances of the proposed approach are compared to the case when the popular data fidelity term ( 1 2 X − AS 2 F ) is used.…”
Section: Processingmentioning
confidence: 99%
“…Many of these approaches have emerged specifically for the analysis of mixtures of molecules that, by themselves, yield a well‐defined diffusion coefficient, so the difficulty is due to overlapping peaks in the spectrum. Other approaches use a global analysis of the signal decay to deconvolute the DOSY spectrum into its individual components based on their characteristic decay rates . Although these approaches are highly effective for samples in where each component has a well‐defined diffusion coefficient, analyzing samples that are mixtures of a single protein that has, perhaps, a distribution of sizes is still complicated.…”
Section: Figurementioning
confidence: 99%