Objective. S-Adenosylmethionine (SAM) and S-adenosylhomocysteine (SAH) are indicators of global transmethylation and may play an important role as markers of severity of COVID-19. Methods. The levels of plasma SAM and SAH were determined in patients admitted with COVID-19 (
n
=
56
,
mean
age
=
61
). Lung injury was identified by computed tomography (CT) in accordance with the CT0-4 classification. Results. SAM was found to be a potential marker of lung damage risk in COVID-19 patients (
SAM
>
80
nM
; CT3,4 vs. CT 0-2: relative ratio (RR) was 3.0;
p
=
0.0029
).
SAM
/
SAH
>
6.0
was also found to be a marker of lung injury (CT2-4 vs. CT0,1:
RR
=
3.47
,
p
=
0.0004
). There was a negative association between SAM and glutathione level (
ρ
=
−
0.343
,
p
=
0.011
). Interleukin-6 (IL-6) levels were associated with SAM (
ρ
=
0.44
,
p
=
0.01
) and SAH (
ρ
=
0.534
,
p
=
0.001
) levels. Conclusions. A high SAM level and high methylation index are associated with the risk of lung injury in patients with COVID-19. The association of SAM with IL-6 and glutathione indicates an important role of transmethylation in the development of cytokine imbalance and oxidative stress in patients with COVID-19.