Theory and practice of simulation of optical tweezers, Journal of Quantitative Spectroscopy and Radiative Transfer, http://dx.doi.org/10.1016/j.jqsrt.2016.12.026 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting galley proof before it is published in its final citable form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.
AbstractComputational modelling has made many useful contributions to the field of optical tweezers. One aspect in which it can be applied is the simulation of the dynamics of particles in optical tweezers. This can be useful for systems with many degrees of freedom, and for the simulation of experiments. While modelling of the optical force is a prerequisite for simulation of the motion of particles in optical traps, non-optical forces must also be included; the most important are usually Brownian motion and viscous drag. We discuss some applications and examples of such simulations. We review the theory and practical principles of simulation of optical tweezers, including the choice of method of calculation of optical force, numerical solution of the equations of motion of the particle, and finish with a discussion of a range of open problems.