Ontology for genome comparison and genomic rearrangements

Flanagan, Keith; Stevens, Robert; Pocock, Matthew; Lee, Pete; Wipat, Anil

doi:10.1002/cfg.436

Cited by 4 publications

(3 citation statements)

References 20 publications

(17 reference statements)

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“…The proposition on this study is to combine the theoretical approach for Sustainability Science (Kumazawa et.al., 2009), the Taxonomy of the Human Factors and Ergonomics (HFE) discipline proposed by Meister (1999) as as shown in Table 2 and the framework for Evidence-Based Medicine (Evidence-Based Medicine Working Group, 1992, Woolf, 2001, Dawes & Sampson, 2003, in an attempt to be applied in Human Factors and Ergonomics. Applications of ontologies are known in the field of medical research (for examples, see (Flanagan et al,2005;Musen, 1992)) for lexicon or taxonomy-like descriptions of diseases or the genome, and computer science (for examples, see Antoniou & Van Harmelen (2004)) for information retrieval and search methodologies.…”

Section: Evidence-based Ergonomics Model (Ebe): Proposing a Referencementioning

confidence: 99%

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Evidence-based ergonomics: a model and conceptual structure proposal

Silveira

2012

Work

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In Human Factors and Ergonomics Science (HFES), it is difficult to identify what is the best approach to tackle the workplace and systems design problems which needs to be solved, and it has been also advocated as transdisciplinary and multidisciplinary the issue of "How to solve the human factors and ergonomics problems that are identified?". The proposition on this study is to combine the theoretical approach for Sustainability Science, the Taxonomy of the Human Factors and Ergonomics (HFE) discipline and the framework for Evidence-Based Medicine in an attempt to be applied in Human Factors and Ergonomics. Applications of ontologies are known in the field of medical research and computer science. By scrutinizing the key requirements for the HFES structuring of knowledge, it was designed a reference model, First, it was identified the important requirements for HFES Concept structuring, as regarded by Meister. Second, it was developed an evidence-based ergonomics framework as a reference model composed of six levels based on these requirements. Third, it was devised a mapping tool using linguistic resources to translate human work, systems environment and the complexities inherent to their hierarchical relationships to support future development at Level 2 of the reference model and for meeting the two major challenges for HFES, namely, identifying what problems should be addressed in HFE as an Autonomous Science itself and proposing solutions by integrating concepts and methods applied in HFES for those problems.

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Section: Evidence-based Ergonomics Model (Ebe): Proposing a Referencementioning

confidence: 99%

“…Applications of ontologies are known in the field of medical research (for examples, see (Flanagan et al, 2005;Musen, 1992) for lexicon or taxonomy-like descriptions of diseases or the genome, and computer science (for examples, see Antoniou & Van Harmelen (2004)) for information retrieval and search methodologies.…”

Section: Evidence-based Hfes Data Retrievalmentioning

confidence: 99%

Evidence-based ergonomics: a model and conceptual structure proposal

Silveira

2012

Work

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“…In 2001, Collins and Venter announced to the world the culmination of the first erasers of human’s genetic map, which were finished two years later (2003), completing our genetic map. 3 , 4 …”

Section: Introductionmentioning

confidence: 99%

Utility of proteomics in obstetric disorders: a review

Núñez

Valdés-Yong²

2015

IJWH

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The study of proteomics could explain many aspects of obstetric disorders. We undertook this review with the aim of assessing the utility of proteomics in the specialty of obstetrics. We searched the electronic databases of MEDLINE, EBSCOhost, BVS Bireme, and SciELO, using various search terms with the assistance of a librarian. We considered cohort studies, case-control studies, case series, and systematic review articles published until October 2014 in the English or Spanish language, and evaluated their quality and the internal validity of the evidence provided. Two reviewers extracted the data independently, then both researchers simultaneously revised the data later, to arrive at a consensus. The search retrieved 1,158 papers, of which 965 were excluded for being duplicates, not relevant, or unrelated studies. A further 86 papers were excluded for being guidelines, protocols, or case reports, along with another 64 that did not contain relevant information, leaving 43 studies for inclusion. Many of these studies showed the utility of proteomic techniques for prediction, pathophysiology, diagnosis, management, monitoring, and prognosis of pre-eclampsia, perinatal infection, premature rupture of membranes, preterm birth, intrauterine growth restriction, and ectopic pregnancy. Proteomic techniques have enormous clinical significance and constitute an invaluable weapon in the management of obstetric disorders that increase maternal and perinatal morbidity and mortality.

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Current awareness on comparative and functional genomics

2005

Comp Funct Genom

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In order to keep subscribers up-to-date with the latest developments in their field, this current awareness service is provided by John Wiley & Sons and contains newly-published material on comparative and functional genomics. Each bibliography is divided into 16 sections. I Reviews & symposia; 2 General; 3 Large-scale sequencing and mapping; 4 Evolutionary genomics; 5 Comparative genomics; 6 Pathways, gene families and regulons; 7 Pharmacogenomics; 8 EST, cDNA and other clone resources; 9 Functional genomics; I0 Transcriptomics; II Proteomics; I2 Protein structural genomics; I3 Metabolomics; I4 Genomic approaches to development; I5 Technological advances; I6 Bioinformatics. Within each section, articles are listed in alphabetical order with respect to author. If, in the preceding period, no publications are located relevant to any one of these headings, that section will be omitted.

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Ontology for genome comparison and genomic rearrangements

Cited by 4 publications

References 20 publications

Evidence-based ergonomics: a model and conceptual structure proposal

Evidence-based ergonomics: a model and conceptual structure proposal

Utility of proteomics in obstetric disorders: a review

Current awareness on comparative and functional genomics

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