Each strain of Neisseria gonorrhoeae elaborates a single porin polypeptide, with the porins expressed by different strains comprising two general classes, Por1A and Por1B. In the outer membrane, each porin molecule folds into 16 membrane-spanning -strands joined by top-and bottom-loop domains. Por1A and Por1B have similar membrane-spanning regions, but the eight surface-exposed top loops (I to VIII) differ in length and sequence. To determine whether porins, and especially their top loop domains, contribute to bacterial cell surface charge, strain MS11 gonococci that were identical except for expressing a recombinant Por1A, Por1B, or mosaic Por1A-1B polypeptide were compared by whole-cell electrophoresis. These porin variants displayed different electrophoretic mobilities that correlated with the net numbers of charged amino acids within surface-exposed loops of their respective porin polypeptides. The susceptibilities of porin variants to polyanionic sulfated polymers correlated roughly with gonococcal surface charge; those porin variants with diminished surface negativity showed increased sensitivity to the polyanionic sulfated compounds. These observations indicate that porin polypeptides in situ contribute to the surface charge of gonococci, and they suggest that the bacterium's interactions with large sulfated compounds are thereby affected.Porin polypeptide is quantitatively prominent in the gonococcal outer membrane (22,27), where it trimerizes and forms water-filled, voltage-regulated, anion-favoring pores that transport charged, hydrophilic atoms and small molecules across the outer membrane (14, 53). Each gonococcal genome contains a single porin gene whose protein product is identical in all variants of a given strain and formerly has been designated major outer membrane protein, principal outer membrane protein, and protein I. Gonococci (Gc) from diverse strains express porin molecules that generally fall into one of two general classes, Por1A and Por1B (5,10,20); these were initially differentiated by their molecular weight, protease susceptibility, and reactivity with monoclonal antibodies (3,16,30). The primary sequences of Por1A and Por1B porin polypeptides are nearly identical in their membrane-spanning regions but are quite different in surface-exposed domains, as predicted (47) and largely confirmed by antibody epitope mapping (5,18,32,49).Several biological attributes of Gc have been correlated with which porin they produce. Por1A organisms predominate among isolates from systemic infections (4, 7), are usually more resistant than Por1B bacteria to killing by normal human sera (24), and are less resistant than Por1B cells to several antibiotics (6); these differences have been confirmed with Gc that express recombinant porin polypeptides (8). The molecular bases for the apparent relationships between porin phenotype and biological behaviors are unknown.Gram-negative bacteria generally exhibit a net negative surface charge (25), whose molecular origins are incompletely defined except for caps...