Abstract. Optical-resolution photoacoustic microscopy ͑OR-PAM͒ is applied to functional brain imaging in living mice. A near-diffraction-limited bright-field optical illumination is employed to achieve micrometer lateral resolution, and a dual-wavelength measurement is utilized to extract the blood oxygenation information. The variation in hemoglobin oxygen saturation ͑sO 2 ͒ along vascular branching has been imaged in a precapillary arteriolar tree and a postcapillary venular tree, respectively. To the best of our knowledge, this is the first report on in vivo volumetric imaging of brain microvascular morphology and oxygenation down to single capillaries through intact mouse skulls. It is anticipated that: ͑i͒ chronic imaging enabled by this minimally invasive procedure will advance the study of cortical plasticity and neurological diseases; ͑ii͒ revealing the neuroactivity-dependent changes in hemoglobin concentration and oxygenation will facilitate the understanding of neurovascular coupling at the capillary level; and ͑iii͒ combining functional OR-PAM and high-resolution blood flowmetry will have the potential to explore cellular pathways of brain energy metabolism. Advances in brain imaging facilitate the understanding of cognitive phenomena and neurological diseases. However, high-resolution brain imaging through intact animal skulls remains challenging for pure optical modalities because the optical scattering and absorption of the skull degrade the imaging resolution and signal-to-noise ratio ͑SNR͒. Photoacoustic imaging, combining light and ultrasound in a single hybrid technology, suggests a potential solution. Using acousticresolution photoacoustic microscopy ͑AR-PAM͒, Stein et al. recently demonstrated mouse brain imaging through both intact scalp and skull.1 This noninvasive feature is highly desirable for functional or chronic studies; however, with its current spatial resolution ͑lateral resolution: 70 m; axial resolution: 54 m͒, capillaries are not resolvable. To fill the gap, Maslov et al. developed optical-resolution photoacoustic microscopy ͑OR-PAM͒ capable of imaging single capillaries in vivo.2 The lateral resolution of OR-PAM matches the size of a single red blood cell ͑RBC͒, and its sensitivity enables single RBC detection. Here, we report on the first demonstration of OR-PAM for functional brain microvascular imaging down to single capillaries through intact mouse skulls. The minimally invasive feature is favorable for chronic study of cortical plasticity. Moreover, because neuronal activity is widely assumed to spatially correlate most closely to the capillary bed response, 4 improving localization of signals down to the capillary level will enable functional brain mapping at micrometer resolution.Before functional brain imaging, a Swiss Webster mouse ͑Hsd:ND4, Harlan Co., 25-30 g͒ was anesthetized by intraperitoneally administering a dose of 87 mg/ kg ketamine and 13 mg/ kg xylazine and transferred to a stereotaxic imaging stage. The scalp of the mouse was surgically removed, and the ex...