“…A full necropsy was conducted on the 2 thrushes (which died shortly after capture), and samples were collected for virus detection and histopathologic examination. Total RNA was extracted from oral and cloacal swab specimens, from serum from a cardiac blood clot, and from heart, kidney, spleen, and brain tissues by using High Pure RNA Tissue Kit (Roche Diagnostics, Barcelona, Spain) and analyzed by generic flavivirus SYBR Green (QIAGEN, Madrid, Spain) real-time reverse transcription PCR (RT-PCR) and by a generic conventional nested flavivirus RT-PCR ( 9 ). The product of the first PCR (1,048 bp) was resin purified, cloned into pGEM-T (Promega, WI, USA), and sequenced.…”