INTRODUCTIONIdentifying the mechanisms underlying evolutionary changes in form remains a central problem in biology. Analyses of molecular mechanisms provide insights into species and population differences (Shapiro et al., 2004;Yamamoto et al., 2004;Gompel et al., 2005;Hoekstra et al., 2006). Yet, evolutionary and developmental changes in gene activity, and their consequences for organismal form, are interpretable only in a cellular context. For many traits, this context remains poorly understood. A deeper knowledge of how genotypes are translated into phenotypes thus requires a focus on cells: how processes of morphogenesis and differentiation are orchestrated, and how these behaviors are modified within or between species (Parichy, 2005). Here, we test whether distinct cell populations underlying pigment stripe development in the zebrafish, Danio rerio, are present elsewhere in Danio, and how behaviors of these populations have changed evolutionarily.Pigment patterns of Danio fishes provide an opportunity to study genes underlying evolutionary change, the resulting cellular consequences, and how alterations in cell behaviors affect species differences in form. Danios exhibit virtually indistinguishable embryonic and early larval pigment patterns but a diverse array of adult pigment patterns, ranging from horizontal stripes to vertical bars, and from uniform patterns to alternating spots and lines (Quigley et al., 2004;Quigley et al., 2005;Parichy, 2006). Pigment cells comprising these patterns include black melanophores, yellow xanthophores, iridescent iridophores and red erythrophores (Kelsh, 2004;Parichy et al., 2006). Because the cells are readily visible, they allow for analyses of cell behaviors -and how these behaviors differ among species -even as pigment patterns develop in the living fish.Of the many danio adult pigment patterns, that of the zebrafish, D. rerio, is most studied: in a comparative context, the understanding of pattern-forming mechanisms in D. rerio can be used to suggest hypotheses for changes in genes and cell behaviors that may underlie pattern differences among species. Danio rerio embryos develop an early larval pigment pattern that is transformed into the adult pigment pattern beginning ~2 weeks post-fertilization. This metamorphosis involves the loss of embryonic/early larval melanophores and the appearance of 'metamorphic' melanophores that develop from latent precursors (Johnson et al., 1995;Parichy et al., 2000b;Parichy and Turner, 2003b;Quigley et al., 2004). After ~2 additional weeks, an early adult pigment pattern has formed, consisting of two dark 'primary' stripes of melanophores and a single light 'primary interstripe' of xanthophores and iridophores. During later growth, additional stripes and interstripes are added (Fig. 1A).Metamorphic melanophores in adult stripes of D. rerio appear homogeneous yet actually comprise two populations (Fig. 1B) (Johnson et al., 1995;Parichy et al., 1999;Parichy et al., 2000b The cellular bases for evolutionary changes in adult form rema...