“…Originally, these plots were simply developed as a tool to visually explore the structure of multivariate data in a low-dimensional subspace that summarizes the bulk of shape variation along a few components (15,36), but the interpretation of the scatterplot patterns spread in terms of origins, relatedness, evolution, gene flow, speciation, and phenotypic/genotypic variation of the samples and taxa (8,30,41,42,48,49,53,57,59,67,84,111,114). It is also commonly assumed that the proximity of the samples is evidence of relatedness and shared evolutionary history (48,79,114), whereas their absence indicates the opposite. Moreover, the variation/covariation along some PCs is considered to reflect specific morphological traits (16,53,115).…”