The study included examine of 25 samples of hydatid cysts of Echinococcus granulosus (20 human samples and 5sheep samples) During the study period from January 2019 -December 2019, Human hydatid cysts samples were collected from some hospitals in the middle Euphrates provinces, which are the hospitals of Al-Muthanna, Al-Diwaniyah, Al-Najafalashraf and Babil province hospitals, Sheep hydatid cysts samples from the animals abattoirs in the same provinces. The study aimed to determine the morphological characters of hydatid cysts and protoscoleses and differences between strains by studying the numbers of number,shape, Size and color of germinal layer of hydatid cysts also number of rostellar hooks, arrangement, measuring the total length and blade length (BL) of hooks, Size of smallhooks (SH) and large hooks(LH) for protoscoleces its shapes in studied hydatidcysts. The highest percentage of organ infection in humans was in the liver by 75%, then the lungs by 25%,no cysts the spleen and other organs was recorded. While in sheep, it was 80% in the liver and spleen by 20%, and no cysts in lung was recorded, As for the colors of the germinal layers, 60% was recorded for white color and 40% for yellowish white, and the predominant color is white in humans. And when studying the diameters cysts In the affected organs, it was found that the diameter of the cysts ranged between 5 -65 mm, No significant differences In the number and size of cysts in both hosts, the numbers of cysts ranged from 1 to more than 10 cysts. There are significant differences between the number of hooks, as it appeared that the average number of small hooks (SH) in a human is 16 hooks, While the average number of large hooks (LH) was 13.4, the total number was 29.4, While In sheep the average number of small hooks was 17.2, and the average number of large hooks (LH) was 14.6, and the total number of hooks was 32 hooks. This results may be refers to presence different of E. granolosus in human than the sheep.