2013
DOI: 10.1371/journal.pone.0074221
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Molecular Evolution of Enterovirus 68 Detected in the Philippines

Abstract: BackgroundDetection of Enterovirus 68 (EV68) has recently been increased. However, underlying evolutionary mechanism of this increasing trend is not fully understood.MethodsNasopharyngeal swabs were collected from 5,240 patients with acute respiratory infections in the Philippines from June 2009 to December 2011. EV68 was detected by polymerase chain reaction (PCR) targeting for 5′ untranslated region (5′UTR), viral protein 1 (VP1), and VP4/VP2. Phylogenetic trees were generated using the obtained sequences.Re… Show more

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Cited by 35 publications
(49 citation statements)
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“…This suggests that although each of the antisera generated for three lineages was cross-reactive to the strains of other lineages, there were some antigenic differences between lineages 1, 2, and 3 of EV68, although they belong to the single homologous serotype. Several previous studies have shown that multiple lineages of EV68 were detected in each outbreak (6,8,10). The emergence and cocirculation of strains with various antigenic properties in the same community may be a possible mechanism for the rapid increase of EV68 cases in recent years.…”
Section: Discussionmentioning
confidence: 92%
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“…This suggests that although each of the antisera generated for three lineages was cross-reactive to the strains of other lineages, there were some antigenic differences between lineages 1, 2, and 3 of EV68, although they belong to the single homologous serotype. Several previous studies have shown that multiple lineages of EV68 were detected in each outbreak (6,8,10). The emergence and cocirculation of strains with various antigenic properties in the same community may be a possible mechanism for the rapid increase of EV68 cases in recent years.…”
Section: Discussionmentioning
confidence: 92%
“…According to our previous reports, most of the EV68 strains detected in the Philippines belonged to lineage 2, and a few of them belonged to lineage 3 (4,10). The VP1 sequences detected in the Philippines and other countries demonstrated that the amino acid sequence patterns in BC and DE loops were correlated with the categorization of EV68 into the 3 lineages (6,8,10). Generally, loop structures, including BC and DE loops, are located on the viral surface and associated with antigenic epitopes of enteroviruses (11,12).…”
Section: H Uman Enterovirus 68 (Ev68) (Species Human Enterovirus D;mentioning
confidence: 86%
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“…Following the initial outbreaks, EV-D68 continued its seasonal circulation, and was occasionally detected in respiratory samples from paediatric patients with URTI and severe LRTI in different countries, further supporting its clinical relevance [83][84][85][86]. Further concern was raised after the EV-D68 outbreak in the USA in 2014 [87], when over 1000 patients across the country were diagnosed with acute respiratory illness (ARI) caused by EV-D68.…”
Section: Enterovirus 68mentioning
confidence: 99%
“…Imamura et al studied the immunogenic properties of 12 EV-D68 types belonging to all three lineages of EV-D68 -A, B and C [85]. Immunized guinea pigs generated high titres of neutralizing antibodies for the original virus and viruses of the same lineage, but very little crossneutralization between genetic lineages was found [166].…”
Section: Neutralization Of Enterovirus 68mentioning
confidence: 99%