2011
DOI: 10.1093/molehr/gar073
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Microarray analysis of the primate luteal transcriptome during chorionic gonadotrophin administration simulating early pregnancy

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Cited by 18 publications
(29 citation statements)
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“…Processed microarray image (.CEL) files were analyzed using the web-based GeneSifter® software (Geospiza, Inc., Seattle, WA, USA) and probeset (mRNA) hybridization data were log2-transformed using the Robust Multi-array Average (RMA) algorithm as previously reported (23). All mRNA expression data were interrogated by one-way ANOVA; standard diet (control) versus WSD versus WSD+T (n=3/ group).…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…Processed microarray image (.CEL) files were analyzed using the web-based GeneSifter® software (Geospiza, Inc., Seattle, WA, USA) and probeset (mRNA) hybridization data were log2-transformed using the Robust Multi-array Average (RMA) algorithm as previously reported (23). All mRNA expression data were interrogated by one-way ANOVA; standard diet (control) versus WSD versus WSD+T (n=3/ group).…”
Section: Methodsmentioning
confidence: 99%
“…Pairwise comparisons were performed on SAF mRNA levels between standard diet controls, WSD, and WSD+T by Welch’s T-test (≥2 fold, P<0.05). KEGG analysis was performed on the list of significantly altered mRNAs similar to previous methods (23). Significant ontologies identified by GeneSifter were refined by eliminating those in which fewer than 5 gene products were associated with the ontology (too narrow classification), and with greater than 100 gene products (too broad) similar to Doniger et al (24).…”
Section: Methodsmentioning
confidence: 99%
“…A cohort of adult, female rhesus macaques (n=25) with a history of normal menstrual cycles were maintained for this study. Hormonal status of each female was monitored for detection of ovulation as previously described [27]; the first day that the serum estradiol (E2) level declines at midcycle below 100 pg/ml with a coincident rise in serum progesterone (P4) was denoted as the first day of the luteal phase, in accordance with previous studies demonstrating the LH-surge occurs the day before E2 levels decline [28]. Monkeys were under the direct care of the ONPRC Department of Comparative Medicine (DCM); all protocols requiring sterile aseptic surgical procedures were performed by trained nonhuman primate (NHP) surgical veterinarians and technicians in the DCM Surgical Services Unit (SSU).…”
Section: Methodsmentioning
confidence: 99%
“…This method prolonged luteal function similar to early pregnancy in rhesus females [23, 24]. Evaluation of ovarian/uterine vascular function (CEUS) and ovarian permeability to albumin (DCE-MRI) was performed the day before and at/near the time of peak P4 response to SEP.…”
Section: Methodsmentioning
confidence: 99%