Abstract:Furin-dependent maturation of the BRI2 protein generates the Bri2-23 fragment that is able to arrest the aggregation of amyloidβ, the peptide implicated in Alzheimer's disease (AD). Bri2-23 contains cysteines at positions 5 and 22, which are likely to bind to metal ions such as Cu(i). Metal ions may play a role in the etiology of neurodegenerative disorders such as AD, and in this work we explore the metal ion induced folding and aggregation of Bri2-23 using Hg(ii) and Ag(i) as spectroscopic probes with struct… Show more
“…Much of the early works support that multivalent cations such as Cu 2+ , Zn 2+ , Ca 2+ , Mn 2+ , Fe 3+ promote the aggregation‐prone molten globule state of IDPs by binding with the charged amino acids at the protein surface [32–36] or increasing the mean residence time of hydration‐shell waters [37] . Additionally, the transitional metal ions such as Hg 2+ are reported to favor the transition of the unstructured coil to β‐sheet conformation for IDPs like tau protein [38] . Moreover, Cu 2+ and Zn 2+ are also reported to exhibit a significant effect on prion misfolding and the formation of toxic oligomeric species [39,40] .…”
Section: Introductionmentioning
confidence: 94%
“…[37] Additionally, the transitional metal ions such as Hg 2 + are reported to favor the transition of the unstructured coil to βsheet conformation for IDPs like tau protein. [38] Moreover, Cu 2 + and Zn 2 + are also reported to exhibit a significant effect on prion misfolding and the formation of toxic oligomeric species. [39,40] Thus, the patients with neurodegenerative disorders are found to have elevated concentrations of divalent metal ions (metal dyshomeostasis) in brain and body fluids.…”
The structural sensitivity of the intrinsically disordered proteins with the ions has been observed experimentally; however, it is still unclear how the presence of different metal ions affects structural stability. We performed an atomistic molecular dynamics simulation of sheep prion peptide (142-167) in presence of different monovalent, divalent ions at various concentrations to find out the effect of the size, charge, and ionic concentration on the structure of the peptide. It is found that Li + ions have a higher survival probability compared to Na + , K + , and Mg 2 + affecting the solvation structure of the protein leading to the alpha-helix structure. At high concentration, due to the increase in the ion-solvent and counter-ion interactions, the effect of the ions is screened on the surface of the protein and hence no ion specificity is observed. This study demonstrates how ions can be used to regulate the protein structure and function that can help in designing drugs.
“…Much of the early works support that multivalent cations such as Cu 2+ , Zn 2+ , Ca 2+ , Mn 2+ , Fe 3+ promote the aggregation‐prone molten globule state of IDPs by binding with the charged amino acids at the protein surface [32–36] or increasing the mean residence time of hydration‐shell waters [37] . Additionally, the transitional metal ions such as Hg 2+ are reported to favor the transition of the unstructured coil to β‐sheet conformation for IDPs like tau protein [38] . Moreover, Cu 2+ and Zn 2+ are also reported to exhibit a significant effect on prion misfolding and the formation of toxic oligomeric species [39,40] .…”
Section: Introductionmentioning
confidence: 94%
“…[37] Additionally, the transitional metal ions such as Hg 2 + are reported to favor the transition of the unstructured coil to βsheet conformation for IDPs like tau protein. [38] Moreover, Cu 2 + and Zn 2 + are also reported to exhibit a significant effect on prion misfolding and the formation of toxic oligomeric species. [39,40] Thus, the patients with neurodegenerative disorders are found to have elevated concentrations of divalent metal ions (metal dyshomeostasis) in brain and body fluids.…”
The structural sensitivity of the intrinsically disordered proteins with the ions has been observed experimentally; however, it is still unclear how the presence of different metal ions affects structural stability. We performed an atomistic molecular dynamics simulation of sheep prion peptide (142-167) in presence of different monovalent, divalent ions at various concentrations to find out the effect of the size, charge, and ionic concentration on the structure of the peptide. It is found that Li + ions have a higher survival probability compared to Na + , K + , and Mg 2 + affecting the solvation structure of the protein leading to the alpha-helix structure. At high concentration, due to the increase in the ion-solvent and counter-ion interactions, the effect of the ions is screened on the surface of the protein and hence no ion specificity is observed. This study demonstrates how ions can be used to regulate the protein structure and function that can help in designing drugs.
“…TDPAC spectroscopy was applied to study the metal-binding features of various metalloproteins using the 199m Hg isotope as a spectroscopic probe substituting the native metal ions at the probed metal sites. Studies have been performed with the Hg II -substituted rubredoxin [49] and in the systems of Hg II /Cd II and various zinc-finger model oligopeptides [50], the Hg II -binding of the human metallochaperone HAH1 [51] as well as the 23-mer oligopeptide fragment cleaved off near the C-terminus of the transmembrane protein BRI2 (BRI2-23) [52]. The first two of these examples are discussed here and the latter two in the following sections.…”
Section: Applications In Chemistry and Biochemistrymentioning
confidence: 99%
“…Cu, Zn, Fe) are believed to play various roles in neurodegeneration, however, the metal binding ability of BRI2-23, possessing several potential metal coordinating amino acid residues, including two cysteines at position 5 and 22, is largely unexplored. In this multi-method study, Hg II and Ag I ions were used to probe the Cu I -binding characteristics of BRI2-23 and the effect of the metal ion on the folding and aggregation of the oligopeptide molecules [52]. BRI2-23 inherently possesses a disordered, random coil structure and despite the relatively large distance between the two Cys residues, Hg II binding was observed in a broad pH-range, when the metal ion-peptide ratio was not more than 0.5: 1.…”
Section: Applications In Chemistry and Biochemistrymentioning
Time differential perturbed angular correlation (TDPAC) of γ-rays spectroscopy has been applied in chemistry and biochemistry for decades. Herein we aim to present a comprehensive review of chemical and biochemical applications of TDPAC spectroscopy conducted at ISOLDE over the past 15 years, including elucidation of metal site structure and dynamics in proteins and model systems. β-NMR spectroscopy is well established in nuclear physics, solid state physics, and materials science, but only a limited number of applications in chemistry have appeared. Current endeavors at ISOLDE advancing applications of β-NMR towards chemistry and biochemistry are presented, including the first experiment on 31Mg2+ in an ionic liquid solution. Both techniques require the production of radioisotopes combined with advanced spectroscopic instrumentation present at ISOLDE.
“…[21] Intermolecular Hg II binding to macromolecules is usually related to the toxic activity of the metal and mechanistically relies on the formation of aggregates. Also here, in most cases the metal is majorly bound to thiolate groups, [22][23][24] though the metal promoted aggregation may as well be fulfilled through binding to other medium/soft donors such as imidazole nitrogen. [25] Formation of digonal Hg II species is observed regardless of the accessibility of potential binding sites.…”
In nature, thiolate-based systems are the primary targets of divalent mercury (Hg II ) toxicity. The formation of Hg (Cys) x cores in catalytic and structural protein centers mediates mercury's toxic effects and ultimately leads to cellular damage. Multiple studies have revealed distinct Hg IIthiolate coordination preferences, among which linear Hg II complexes are the most commonly observed in solution at physiological pH. Trigonal or tetrahedral geometries are formed at basic pH or in tight intraprotein Cys-rich metal sites. So far, no interprotein tetrahedral Hg II complex formed at neutral pH has been reported. Rad50 protein is a part of the multiprotein MRN complex, a major player in DNA damage-repair processes. Its central region consists of a conserved CXXC motif that enables dimerization of two Rad50 molecules by coordinating Zn II . Dimerized motifs form a unique interprotein zinc hook domain (Hk) that is critical for the biological activity of the MRN. Using a series of lengthdifferentiated peptide models of the Pyrococcus furiosus zinc hook domain, we investigated its interaction with Hg II . Using UV-Vis, CD, PAC, and 199 Hg NMR spectroscopies as well as anisotropy decay, we discovered that all Rad50 fragments preferentially form homodimeric Hg(Hk) 2 species with a distorted tetrahedral HgS 4 coordination environment at physiological pH; this is the first example of an interprotein mercury site displaying tetrahedral geometry in solution. At higher Hg II content, monomeric HgHk complexes with linear geometry are formed. The Hg(Cys) 4 core of Rad50 is extremely stable and does not compete with cyanides, NAC, or DTT. Applying ITC, we found that the stability constant of the Rad50 Hg(Hk) 2 complex is approximately three orders of magnitude higher than those of the strongest Hg II complexes known to date.
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