Abstract.A novel modeling based on deep learning framework which can exactly manifest the characteristics of nonlinear system is proposed in this paper. Specifically, a Deep Reconstruction are the simulated two-tone signal and actual square wave signal. The second system is a permanent magnet synchronous motor (PMSM) servo control system based on fuzzy PID control strategy. In terms of simulated and actual speed curves, BP-RBMs, DRM and ENN model are adopted on comparison respectively. It is shown by experimental results that the proposed model with fewer parameters and iteration number can reconstruct the nonlinear system accurately, and depict the memory effect, the nonlinear distortion and the dynamic performance of system precisely.