“…However, DNA-based markers are not influenced by environmental conditions, and they allow direct scanning of the plant genome (MartinsLopes et al, 2007;Doveri et al, 2008). Genetic polymorphism of the plants can be detected by many different DNA-based marker methods such as RFLPs (Besnard and Berville, 2000), AFLPs (Sanz-Cortés et al, 2003;Owen et al, 2005), SSRs (Rallo et al, 2000;Cipriani et al, 2002;Belaj et al, 2004), ISSRs (Gemas et al, 2004), and random amplified polymorphic DNAs (RAPDs) (Belaj et al, 2001;Besnard et al, 2001;La Rosa et al, 2003;Wu et al, 2004;Ganino et al, 2007). Additionally, chloroplast and mitochondrial DNA analyses are helpful in examining the genetic structure of plants (Besnard et al, 2002).…”