Integration of proteome and metabolome profiling to reveal heat stress response and tolerance mechanisms of Serratia sp. AXJ-M for the bioremediation of papermaking black liquor

An, Xiaopeng; Li, Ningjian; Zhang, Shulin; Han, Yuling; Zhang, Qinghua

doi:10.1016/j.jhazmat.2023.131092

Cited by 29 publications

(9 citation statements)

References 54 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Although several investigations have been done to compare these endovascular techniques, the selection of efficient method for treatment of various cases is still challenging 6 , 7 . The decisions of medical team are done based on some limited factors and their experience of is more prominent in final decision.…”

Section: Introductionmentioning

confidence: 99%

Investigation of the stent induced deformation on hemodynamic of internal carotid aneurysms by computational fluid dynamics

Salavatidezfouli

Alizadeh

Gerdroodbary

et al. 2023

Sci Rep

View full text Add to dashboard Cite

Application of the stent for treatment of the internal carotid artery (ICA) aneurysms has been extensively increased in recent decades. In the present work, stent-induced deformations of the parent vessel of ICA aneurysms are fully investigated. This study tries to visualize blood stream and calculated hemodynamic factors inside the four ICA aneurysms after deformations of parent vessel. For the simulation of the non-Newtonian blood stream, computational fluid dynamic is applied with one-way Fluid–Solid interaction (FSI) approach. Four ICA aneurysms with different ostium sizes and neck vessel angle are selected for this investigation. Wall shear stress on wall of aneurysm is analyzed in two angles of deformation due to application of the stent. Blood flow investigation shows that the deformation of the aneurysm limited blood entrance to the sac region and this decreases the blood velocity and consequently oscillatory shear index (OSI) on the sac wall. It is also observed that the stent-induced deformation is more effective on those cases with extraordinary OSI values on aneurysm wall.

show abstract

Section: Introductionmentioning

confidence: 99%

Investigation of the stent induced deformation on hemodynamic of internal carotid aneurysms by computational fluid dynamics

Salavatidezfouli

Alizadeh

Gerdroodbary

et al. 2023

Sci Rep

View full text Add to dashboard Cite

show abstract

“…Therefore, targeting CCL2/CCR2 is a feasible anti-tumor treatment strategy. Studies have shown that blocking CCL2/CCR2 interaction can inhibit the recruitment and activation of M2-TAM and significantly reduce the incidence of tumors: blocking CCL2 by crumb (CNTO88) can inhibit the growth of prostate cancer cells ( 111 , 112 ); PF-04136309(CCR2 inhibitor) can act on CCR2+ monocytes, prevent the recruitment and migration of M2-TAM, and further enhance anti-tumor immunity ( 113 ). PF-04136309 also shows good tolerance in the clinical treatment of advanced pancreatic cancer.…”

Section: Expression Of Tams In a Variety Of Tumorsmentioning

confidence: 99%

Reprogramming tumor-associated macrophages as a unique approach to target tumor immunotherapy

Khan

Din

et al. 2023

Front. Immunol.

View full text Add to dashboard Cite

In the last ten years, it has become increasingly clear that tumor-infiltrating myeloid cells drive not just carcinogenesis via cancer-related inflammatory processes, but also tumor development, invasion, and metastasis. Tumor-associated macrophages (TAMs) in particular are the most common kind of leucocyte in many malignancies and play a crucial role in establishing a favorable microenvironment for tumor cells. Tumor-associated macrophage (TAM) is vital as the primary immune cell subset in the tumor microenvironment (TME).In order to proliferate and spread to new locations, tumors need to be able to hide from the immune system by creating an immune-suppressive environment. Because of the existence of pro-tumoral TAMs, conventional therapies like chemotherapy and radiotherapy often fail to restrain cancer growth. These cells are also to blame for the failure of innovative immunotherapies premised on immune-checkpoint suppression. Understanding the series of metabolic changes and functional plasticity experienced by TAMs in the complex TME will help to use TAMs as a target for tumor immunotherapy and develop more effective tumor treatment strategies. This review summarizes the latest research on the TAMs functional status, metabolic changes and focuses on the targeted therapy in solid tumors.

show abstract

“…i.e., the breakdown of TPH using living organisms like bacteria, fungi, and plants. Bacteria are getting attention as the best bioremediating agents because of their fast growth rate, tolerance to a wide range of temperatures (0 to 120°C) ( An et al 2023 ), salinity (0.3 M to 5.9 M) ( Mousa et al 2023 ) and pH (3 to 9) ( Liu et al 2015 ). On the contrary, fungi are mostly mesophilic (surviving at 25 to 30°C) ( Petkova and Shilev 2023 ) and exhibit efficient biomass growth and sporulation only at a pH range of 5.5 to 6.5 ( Gomes et al 2018 ).…”

Section: Introductionmentioning

confidence: 99%

Molecular and metabolic characterization of petroleum hydrocarbons degrading Bacillus cereus

Hussain,

Muccee,

Hammad

et al. 2024

Polish Journal of Microbiology

View full text Add to dashboard Cite

Hydrocarbon constituents of petroleum are persistent, bioaccumulated, and bio-magnified in living tissues, transported to longer distances, and exert hazardous effects on human health and the ecosystem. Bioaugmentation with microorganisms like bacteria is an emerging approach that can mitigate the toxins from environmental sources. The present study was initiated to target the petroleum-contaminated soil of gasoline stations situated in Lahore. Petroleum degrading bacteria were isolated by serial dilution method followed by growth analysis, biochemical and molecular characterization, removal efficiency estimation, metabolites extraction, and GC-MS of the metabolites. Molecular analysis identified the bacterium as Bacillus cereus, which exhibited maximum growth at 72 hours and removed 75% petroleum. Biochemical characterization via the Remel RapID™ ONE panel system showed positive results for arginine dehydrolase (ADH), ornithine decarboxylase (ODC), lysine decarboxylase (LDC), o-nitrophenyl-β-D-galactosidase (ONPG), p-nitrophenyl-β-D-glucosidase (βGLU), p-nitrophenyl-N-acetyl-β-D-glucosaminidase (NAG), malonate (MAL), adonitol fermentation (ADON), and tryptophane utilization (IND). GC-MS-based metabolic profiling identified alcohols (methyl alcohol, o-, p- and m-cresols, catechol, and 3-methyl catechol), aldehydes (methanone, acetaldehyde, and m-tolualdehyde), carboxylic acid (methanoic acid, cis,cis-muconic acid, cyclohexane carboxylic acid and benzoic acid), conjugate bases of carboxylic acids (benzoate, cis,cis-muconate, 4-hydroxybenzoate, and pyruvate) and cycloalkane (cyclohexene). It suggested the presence of methane, methylcyclohexane, toluene, xylene, and benzene degradation pathways in B. cereus.

show abstract

Integration of proteome and metabolome profiling to reveal heat stress response and tolerance mechanisms of Serratia sp. AXJ-M for the bioremediation of papermaking black liquor

Cited by 29 publications

References 54 publications

Investigation of the stent induced deformation on hemodynamic of internal carotid aneurysms by computational fluid dynamics

Investigation of the stent induced deformation on hemodynamic of internal carotid aneurysms by computational fluid dynamics

Reprogramming tumor-associated macrophages as a unique approach to target tumor immunotherapy

Molecular and metabolic characterization of petroleum hydrocarbons degrading Bacillus cereus

Contact Info

Product

Resources

About