Abstract:Isothiocyanates (ITCs) are produced by the enzymatic hydrolysis of glucosinolates in cruciferous plants and can kill fungi, oomycetes and bacteria. The effect of 2-phenylethyl ITC (2-PE ITC), the main ITC liberated from the roots of canola, was tested in vitro on a range of fungi, oomycetes and bacteria. Bacteria were generally more tolerant than the eukaryotic pathogens to 2-PE ITC, although both groups showed considerable variability in response (ED 90 ranging from 0·005 to 1·5 m m for eukaryotes, and from 0… Show more
“…Differential effects on microbial populations that we observed could result from variable direct susceptibility of populations towards antimicrobial properties of hydrolysis products of glucosinolates (Smith and Kirkegaard, 2002;Kliebenstein et al, 2005;Brader et al, 2006). Beside their antimicrobial effect, glucosinolates and their hydrolysis products could also stimulate microbial growth.…”
Section: Discussionmentioning
confidence: 77%
“…Fungi modifications are expected according to literature. They were reported to be more sensitive than bacteria to these compounds (Smith and Kirkegaard, 2002). The formation of antimicrobial products from glucosinolates has been also suggested to explain the inability of Brassicaceae plants to form arbuscular mycorrhizal (Vierheilig et al, 2000;Roberts and Anderson, 2001).…”
Section: Discussionmentioning
confidence: 99%
“…The effects on fungal and bacterial responses of the glucosinolate-myrosinase defense system have already been described. However, these studies implicated pure strains of pathogen organisms and in vitro approaches (Brabban and Edwards, 1995;Kirkegaard et al, 1996;Smith and Kirkegaard, 2002;Souza-Fagundes et al, 2004). The incorporation of crucifer tissues showed a variety of effects on non-target soil microbial populations in studies based on isolation and culture of microorganisms (Scott and Knudsen, 1999;Bending and Lincoln, 2000;Cohen et al, 2005).…”
A specificity of Brassicaceous plants is the production of sulphur secondary metabolites called glucosinolates that can be hydrolysed into glucose and biocidal products. Among them, isothiocyanates are toxic to a wide range of microorganisms and particularly soil-borne pathogens. The aim of this study was to investigate the role of glucosinolates and their breakdown products as a factor of selection on rhizosphere microbial community associated with living Brassicaceae. We used a DNA-stable isotope probing approach to focus on the active microbial populations involved in root exudates degradation in rhizosphere. A transgenic Arabidopsis thaliana line producing an exogenous glucosinolate and the associated wild-type plant associated were grown under an enriched 13 CO 2 atmosphere in natural soil. DNA from the rhizospheric soil was separated by density gradient centrifugation. Bacterial (Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria and Acidobacteria), Archaea and fungal community structures were analysed by DGGE fingerprints of amplified 16S and 18S rRNA gene sequences. Specific populations were characterized by sequencing DGGE fragments. Roots of the transgenic plant line presented an altered profile of glucosinolates and other minor additional modifications. These modifications significantly influenced microbial community on roots and active populations in the rhizosphere. Alphaproteobacteria, particularly Rhizobiaceae, and fungal communities were mainly impacted by these Brassicaceous metabolites, in both structure and composition. Our results showed that even a minor modification in plant root could have important repercussions for soil microbial communities.
“…Differential effects on microbial populations that we observed could result from variable direct susceptibility of populations towards antimicrobial properties of hydrolysis products of glucosinolates (Smith and Kirkegaard, 2002;Kliebenstein et al, 2005;Brader et al, 2006). Beside their antimicrobial effect, glucosinolates and their hydrolysis products could also stimulate microbial growth.…”
Section: Discussionmentioning
confidence: 77%
“…Fungi modifications are expected according to literature. They were reported to be more sensitive than bacteria to these compounds (Smith and Kirkegaard, 2002). The formation of antimicrobial products from glucosinolates has been also suggested to explain the inability of Brassicaceae plants to form arbuscular mycorrhizal (Vierheilig et al, 2000;Roberts and Anderson, 2001).…”
Section: Discussionmentioning
confidence: 99%
“…The effects on fungal and bacterial responses of the glucosinolate-myrosinase defense system have already been described. However, these studies implicated pure strains of pathogen organisms and in vitro approaches (Brabban and Edwards, 1995;Kirkegaard et al, 1996;Smith and Kirkegaard, 2002;Souza-Fagundes et al, 2004). The incorporation of crucifer tissues showed a variety of effects on non-target soil microbial populations in studies based on isolation and culture of microorganisms (Scott and Knudsen, 1999;Bending and Lincoln, 2000;Cohen et al, 2005).…”
A specificity of Brassicaceous plants is the production of sulphur secondary metabolites called glucosinolates that can be hydrolysed into glucose and biocidal products. Among them, isothiocyanates are toxic to a wide range of microorganisms and particularly soil-borne pathogens. The aim of this study was to investigate the role of glucosinolates and their breakdown products as a factor of selection on rhizosphere microbial community associated with living Brassicaceae. We used a DNA-stable isotope probing approach to focus on the active microbial populations involved in root exudates degradation in rhizosphere. A transgenic Arabidopsis thaliana line producing an exogenous glucosinolate and the associated wild-type plant associated were grown under an enriched 13 CO 2 atmosphere in natural soil. DNA from the rhizospheric soil was separated by density gradient centrifugation. Bacterial (Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria and Acidobacteria), Archaea and fungal community structures were analysed by DGGE fingerprints of amplified 16S and 18S rRNA gene sequences. Specific populations were characterized by sequencing DGGE fragments. Roots of the transgenic plant line presented an altered profile of glucosinolates and other minor additional modifications. These modifications significantly influenced microbial community on roots and active populations in the rhizosphere. Alphaproteobacteria, particularly Rhizobiaceae, and fungal communities were mainly impacted by these Brassicaceous metabolites, in both structure and composition. Our results showed that even a minor modification in plant root could have important repercussions for soil microbial communities.
“…The presence of glucosinolates in root tissues can reduce the growth of fungi and oomycetes (Smith and Kirkegaard, 2002). Larkin and Griffin (2007) reported that when rapeseed was grown as a green manure crop, it reduced powdery scab infections in a subsequent potato crop.…”
“…However, Smith and Kirkegaard (2002) found out that species of Trichoderma genus are tolerant to the above compounds. Curl (1982) even stated that plant excretions can improve the phytosanitary condition of soils through a better development of fungi inhibiting the growth of pathogens.…”
The research project was carried out as a field experiment with application of the following crop rotation system: industrial potato, spring barley for fodder, winter rape and winter wheat, established in the random distribution of blocks in triplicate on gleyic luvisol formed of silty light loam. The aim of the research was to determine the influence of diversified organic fertilization based on composted wastewater sediments and farm manure on the community of soil fungi as compared to fields without fertilization and with NPK fertilization only. The fungi were cultured on the Martin medium and were counted and identified afterwards. As a result of three-year field experiments it was established that organic fertilization had a more determining effect on qualitative composition than numbers of soil fungi. Total number of fungal colony-forming units in the soil fertilized with Biohum at 10 t/ha and 5 t/ha was significantly higher than in soil with mineral NPK fertilization and without fertilization. Most frequently pathogens populated the soil in fields without fertilization and to a lesser extent the soil with mineral NPK fertilization. A positive influence of organic fertilizers on the fungal community structure was recorded. The number of pathogens was limited (to 1.2% in fields fertilized with farm manure) while the population of saprotrophic fungi possessing antagonistic properties increased.
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