The DA strain of Theiler's murine encephalomyelitis virus persists in the white matter of the spinal cords of susceptible mice. Previous results showed that the difference in susceptibility to viral persistence between the susceptible SJL/J strain and the resistant B10.S strain was due to multiple non-H-2 loci. The respective roles of hematopoietic and nonhematopoietic cells in this difference have been evaluated with bone marrow chimeras. The results show that non-H-2 loci with a major effect on susceptibility are expressed in hematopoietic cells. However, the study of the SJL.B10-D10Mit180-D10Mit74 congenic line suggests that other loci expressed in nonhematopoietic cells also play a role.The primary demyelinating disease induced by Theiler's murine encephalomyelitis virus is studied as an animal model for multiple sclerosis (13,16). After intracranial inoculation, the DA strain of Theiler's virus replicates in neurons of the brain and spinal cord in all strains of mice (30). This encephalomyelitis disappears after 2 weeks regardless of the mouse genotype. However, in genetically susceptible mice the virus persists for the lifetime of the animal in the white matter of the spinal cord in oligodendrocytes, macrophages, and possibly astrocytes (3,15,18,25,26) and induces chronic inflammation and primary demyelination (1,8,17,22). A previous study accounted for the variation of viral RNA level in 17 inbred strains by the interaction of two groups of loci (11). One locus with a major effect was named Tmevp1 for Theiler's murine encephalomyelitis virus persistence locus 1. It is located on chromosome 17 in the H-2D region. Several reports strongly suggest that the same locus controls not only viral persistence but also demyelination (14,20,27,29) and that the H-2D b class I gene plays a major role in resistance to both (4,19,28). The existence of non-H-2 susceptibility loci is shown by the fact that the SJL/J strain is more susceptible to viral persistence than the B10.S strain, although both bear the same H-2 s haplotype (11). Two of these non-H-2 loci, named Tmevp2 and Tmevp3, have been located on chromosome 10 close to Ifng by studying an F 1 (SJL/J ϫ B10.S) ϫ B10.S backcross and SJL/J lines congenic for different B10.S genetic intervals of chromosome 10 (7, 10). However, the Ifng gene does not explain the effect of either Tmevp2 or Tmevp3 (7, 24). One of these studies also showed that other susceptibility loci, with minor effects, must contribute to the difference in viral RNA load between these two mouse strains (10).The non-H-2 loci responsible for the difference in susceptibility between the SJL/J and the B10.S strains could affect the efficiency of the immune response against the virus or the viral life cycle. To distinguish between these possibilities, we measured the viral RNA load in bone marrow chimeras between these two immunocompatible H-2 s strains. The SJL.B10-D10Mit180-D10Mit74 congenic line, which has a small B10.S genetic interval containing the Tmevp3 locus (7), was also studied in an attempt to ...