2019
DOI: 10.1002/ece3.5694
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Genomic pedigree reconstruction identifies predictors of mating and reproductive success in an invasive vertebrate

Abstract: The persistence of an invasive species is influenced by its reproductive ecology, and a successful control program must operate on this premise. However, the reproductive ecology of invasive species may be enigmatic due to factors that also limit their management, such as cryptic coloration and behavior. We explored the mating and reproductive ecology of the invasive Brown Treesnake (BTS: Boiga irregularis) by reconstructing a multigenerational genomic pedigree based on 654 single nucleotide polymorphisms for … Show more

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Cited by 14 publications
(14 citation statements)
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“…The presence of whole genomic DNA was confirmed by separating 5 μL of each DNA sample on a 1.5% agarose gel for 60 minutes at 100 mV and visualizing with SYBR TM Safe DNA gel stain (Invitrogen TM ). DNA was then prepared for high throughput, parallel sequencing using a double-digest restriction-site associated DNA (ddRAD) library preparation protocol [ 40 ], slightly modified from that described for snakes by Levine et al [ 41 ]. Approximately 1000 ng DNA of each sample was digested in a thermocycler for 16 hours at 37°C with 1 μL each of FastDigest TM restriction enzymes PstI and MspI (Thermo Scientific TM ), 5 μL FastDigest 10× buffer (Thermo Scientific TM ) and 3 μL molecular grade water.…”
Section: Methodsmentioning
confidence: 99%
“…The presence of whole genomic DNA was confirmed by separating 5 μL of each DNA sample on a 1.5% agarose gel for 60 minutes at 100 mV and visualizing with SYBR TM Safe DNA gel stain (Invitrogen TM ). DNA was then prepared for high throughput, parallel sequencing using a double-digest restriction-site associated DNA (ddRAD) library preparation protocol [ 40 ], slightly modified from that described for snakes by Levine et al [ 41 ]. Approximately 1000 ng DNA of each sample was digested in a thermocycler for 16 hours at 37°C with 1 μL each of FastDigest TM restriction enzymes PstI and MspI (Thermo Scientific TM ), 5 μL FastDigest 10× buffer (Thermo Scientific TM ) and 3 μL molecular grade water.…”
Section: Methodsmentioning
confidence: 99%
“…Here, mating success is defined as the number of mates with which an individual produced offspring, and reproductive success as the number of offspring produced by an individual, following Levine et al . [ 28 ].
Figure 1.
…”
Section: Methodsmentioning
confidence: 99%
“…Using these parentage assignments, the total mating and reproductive success for males and females over the course of the study were quantified (figures 1 and 2; electronic supplementary material), as were annual mating and reproductive success for males and females (electronic supplementary material). Here, mating success is defined as the number of mates with which an individual produced offspring, and reproductive success as the number of offspring produced by an individual, following Levine et al [28].…”
Section: Study Systemmentioning
confidence: 99%
“…However, this information is lacking for most amphibian species in the wild (O'Brien et al 2018). Pedigree information from direct records or parentage re-construction from genetic methods can provide robust inferences about the number of successfully breeding males and females and the rates of polygamy of each sex, therefore allowing exploration of the mating system and breeding success of target species (Vieites et al 2004;Rovelli et al 2015;Levine et al 2019). The sibship frequency method infers the parentage of an offspring sample jointly with an estimate of the effective population size (Wang 2009b;Mangold et al 2015).…”
Section: Introductionmentioning
confidence: 99%
“…2015; Levine et al . 2019). The sibship frequency method infers the parentage of an offspring sample jointly with an estimate of the effective population size (Wang 2009b; Mangold et al .…”
Section: Introductionmentioning
confidence: 99%