“…With these available genomic sequences, it is possible to determine the evolutionary relationships among fungi [21][22][23][24], as well as to explore the evolution of nutritional mode. In addition, numerous gene clusters associated with pathogenicity have been identified, including secretory proteins, membrane transport proteins, pathogen-host interaction (PHI) genes, fungal virulence factors, and fungal G proteins [17,18]. In addition, some expanded or contracted orthologous, species-specific genes and positive selective genes, including protein kinases, serine peptidases, cell-wall proteins, carbohydrate-active enzymes (CAZymes), secondary metabolites (SMs), and P450, were shown to be involved in biological control activity, pathogenesis, and mycoparasitism [21,22,24].…”