The chromosome of the filamentous bacterium Streptomyces coelicolor is linear, but the genetic map is circular. We present cytological evidence based on the use of fluorescence in situ hybridization showing that the ends of the chromosome frequently colocalize, in agreement with the idea that the ends are held together, effectively forming a circular chromosome. These observations provide a possible explanation for how a linear bacterial chromosome can exhibit a circular genetic map.With over 500 species recognized to date, Streptomyces forms a large genus in the high-GC-content group of grampositive bacteria. Members of this group of spore-forming, filamentous soil bacteria undergo a complex life cycle characterized by various morphologic stages (5, 6). When grown on solid media, spores germinate and develop into substrate mycelia consisting of multinucleated, long branching filaments with infrequent septa. As the colony matures, filaments termed aerial mycelia project above the colony surface. Spores, each containing a single chromosome, are then formed by synchronized septation in the multinucleated aerial filaments. Most species of Streptomyces do not sporulate when they are grown in liquid cultures.Streptomyces coelicolor A(3)2 is the best-characterized species from a genetic point of view (17). The earliest evidence that the genetic map of S. coelicolor is circular came from conjugative mating experiments involving differentially marked strains (13,14). All later studies, including protoplast fusion experiments (18), supported the circularity of the genetic map unequivocally. Thus, it came as a surprise when the chromosome of the related species Streptomyces lividans 66 was suggested to be linear by physical mapping data (23). Later, through the application of pulsed-field gel electrophoresis, both the S. coelicolor and S. lividans chromosomes were shown to be linear (24). Whereas most experimentally studied bacteria possess a circular genome, a few, including the Lyme disease-causing spirochete Borrelia burgdorferi (3, 9), the obligate intracellular bacterium Coxiella burnetii (36), and the erythromycin-producing actinomycete Saccharopolyspora erythraea (28), have been found to possess linear genomes. Agrobacterium tumefaciens possess two chromosomes, one that is linear and one that is circular (1). More prokaryotes are likely to be found to possess linear genomes as the physical maps of more bacterial species become available. Of the prokaryotes known to have linear genomes, only Streptomyces has a well-developed genetic system. The discovery of a linear genome exhibiting circular genetic behavior in Streptomyces leads to an interesting question: how is a circular genetic map obtained from a linear genome?The only other known examples of a linear genome exhibiting circular genetic behavior are certain phage genomes such as that of T4 (33), where map circularity results from their circularly permutated and terminally redundant chromosomes. However, circular permutation does not apply to Streptomyces since...