Fungal and Bacterial Respiration in Urban Technosols vs. Natural Soils

Ivashchenko, Kristina; Ananyeva, N. D.; Sushko, Sofia; Paltseva, Anna; Seleznyova, Alexandra; Plushchikov, Vadim; Kudeyarov, V. N.

doi:10.1007/978-3-030-16091-3_12

Cited by 3 publications

(1 citation statement)

References 43 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…It appears that this soil specificity of outcomes extends to measures of microbial community composition, with Blau et al (2018) reporting impacts of streptomycin containing manure on microbial community structure to be soil texture dependent, while Lin et al (2016) reported the effect of tetracycline on the composition of the soil microbiome to be highly transient. Furthermore, the dose range at which antimicrobials can inhibit the functioning of the microbiome can vary by an order of 1000 depending on the soil (Ivashchenko et al, 2018), which would present challenges in defining standardized test guidelines. Wang et al (2021) studied the effects of the soil disinfectants dazomet, fenaminosulf, and kasugamycin on the soil microbiome; however, these compounds did not alter the predominant bacterial taxa of soil bacteria but did impact the relative abundance and diversity of the soil communities.…”

Section: Study Validitymentioning

confidence: 99%

Considerations for the inclusion of metabarcoding data in the plant protection product risk assessment of the soil microbiome

Sweeney

Kaushik

Bottoms

2023

Integr Envir Assess & Manag

View full text Add to dashboard Cite

There is increasing interest in further developing the plant protection product (PPP) environmental risk assessment, particularly within the European Union, to include the assessment of soil microbial community composition, as measured by metabarcoding approaches. However, to date, there has been little discussion as to how this could be implemented in a standardized, reliable, and robust manner suitable for regulatory decision‐making. Introduction of metabarcoding‐based assessments of the soil microbiome into the PPP risk assessment would represent a significant increase in the degree of complexity of the data that needs to be processed and analyzed in comparison to the existing risk assessment on in‐soil organisms. The bioinformatics procedures to process DNA sequences into community compositional data sets currently lack standardization, while little information exists on how these data should be used to generate regulatory endpoints and the ways in which these endpoints should be interpreted. Through a thorough and critical review, we explore these challenges. We conclude that currently, we do not have a sufficient degree of standardization or understanding of the required bioinformatics and data analysis procedures to consider their use in an environmental risk assessment context. However, we highlight critical knowledge gaps and the further research required to understand whether metabarcoding‐based assessments of the soil microbiome can be utilized in a statistically and ecologically relevant manner within a PPP risk assessment. Only once these challenges are addressed can we consider if and how we should use metabarcoding as a tool for regulatory decision‐making to assess and monitor ecotoxicological effects on soil microorganisms within an environmental risk assessment of PPPs. Integr Environ Assess Manag 2023;00:1–22. © 2023 SETAC

show abstract

Section: Study Validitymentioning

confidence: 99%

Considerations for the inclusion of metabarcoding data in the plant protection product risk assessment of the soil microbiome

Sweeney

Kaushik

Bottoms

2023

Integr Envir Assess & Manag

View full text Add to dashboard Cite

show abstract

Search for approaches to producing organic fertilizers from raw materials of plant and animal origin

Валиуллин¹,

Titova²,

Tremasov³

et al. 2020

IOP Conf. Ser.: Earth Environ. Sci.

View full text Add to dashboard Cite

Due to the annual increase in emissions of animal and poultry waste into the environment, scientists around the world are increasingly interested in improving technologies to accelerate the processing of agricultural waste. In the presented work, 6 microorganisms were selected: Lactobacillus spp., thermophilic bacteria (Bac. subtilis), Clostridium spp., Penicililum spp., Saccharomyces cerevisiae, Micrococcus nishomyaensis) to accelerate the processing of animal waste. The toxicity and toxigenicity of newly isolated strains of microorganisms was assessed. At the same time, it was found that the strains of microorganisms do not have toxicity and toxigenicity.

show abstract

Microbial Indicators of Urban Soils and Their Role in the Assessment of Ecosystem Services: a Review

2021

View full text Add to dashboard Cite

Fungal and Bacterial Respiration in Urban Technosols vs. Natural Soils

Cited by 3 publications

References 43 publications

Considerations for the inclusion of metabarcoding data in the plant protection product risk assessment of the soil microbiome

Considerations for the inclusion of metabarcoding data in the plant protection product risk assessment of the soil microbiome

Search for approaches to producing organic fertilizers from raw materials of plant and animal origin

Microbial Indicators of Urban Soils and Their Role in the Assessment of Ecosystem Services: a Review

Contact Info

Product

Resources

About