Calexcitin/cp20 is a low molecular weight GTP-and Ca
2؉-binding protein, which is phosphorylated by protein kinase C during associative learning, and reproduces many of the cellular effects of learning, such as the reduction of potassium currents in neurons. Here, the secondary structure of cloned squid calexcitin was determined by circular dichroism in aqueous solution and by Fourier transform infrared spectroscopy both in solution and on dried films. The results obtained with the two techniques are in agreement with each other and coincide with the secondary structure computed from the amino acid sequence. In solution, calexcitin is one-third in ␣-helix and one-fifth in -sheet. The conformation of the protein in solid state depends on the concentration of the starting solution, suggesting the occurrence of surface aggregation. The secondary structure also depends on the binding of calcium, which causes an increase in ␣-helix and a decrease in -sheet, as estimated by circular dichroism. The conformation of calexcitin is independent of ionic strength, and the calciuminduced structural transition is slightly inhibited by Mg 2؉ and low pH, while favored by high pH. The switch of calexcitin's secondary structure upon calcium binding, which was confirmed by intrinsic fluorescence spectroscopy and nondenaturing gel electrophoresis, is reversible and occurs in a physiologically meaningful range of Ca 2؉ concentration. The calcium-bound form is more globular than the apoprotein. Unlike other EFhand proteins, calexcitin's overall lipophilicity is not affected by calcium binding, as assessed by hydrophobic liquid chromatography. Preliminary results from patchclamp experiments indicated that calcium is necessary for calexcitin to inhibit potassium channels and thus to increase membrane excitability. Therefore the calciumdependent conformational equilibrium of calexcitin could serve as a molecular switch for the short term modulation of neuronal activity following associative conditioning.Pavlovian conditioning in animal models has been used to study associative learning and memory on a cellular and molecular basis. Following this strategy, a 22-kDa, low abundance