Abstract:Cerebrotendinous xanthomatosis (CTX) is a rare autosomal recessive disorder of bile acid synthesis caused by pathogenic variants in the CYP27A1 gene encoding the mitochondrial enzyme sterol 27‐hydroxylase. Patients with CTX can present with a wide range of symptoms, but most often have evidence of tendon xanthomas along with possible cataracts, atherosclerosis, or neurological dysfunction. Regardless of clinical phenotype, CTX patients typically exhibit levels of cholestanol and bile acid precursors in the cir… Show more
“…Interestingly, this case diverges from the typical clinical form of CTX by plasma cholestanol in the upper normal range; the absence of neurological disease, cataract or chronic diarrhea; and the severity of the xanthomatosis with development in adulthood [10]. It should be noted that one of the rare reported cases of CTX with normal cholestanol did not present any neurological symptomatology [4].…”
Section: Figmentioning
confidence: 86%
“…In 2018, Sekijima et al proposed inclusion criteria with a high cholestanol level as a required criterion [3]. However, several series have reported a few cases of atypical CTX with normal cholestanol levels but with biallelic CYP27A1 pathogenic variants [4].…”
Section: Tuberous Xanthomatosis Is Not Necessarily Associated With In...mentioning
“…Interestingly, this case diverges from the typical clinical form of CTX by plasma cholestanol in the upper normal range; the absence of neurological disease, cataract or chronic diarrhea; and the severity of the xanthomatosis with development in adulthood [10]. It should be noted that one of the rare reported cases of CTX with normal cholestanol did not present any neurological symptomatology [4].…”
Section: Figmentioning
confidence: 86%
“…In 2018, Sekijima et al proposed inclusion criteria with a high cholestanol level as a required criterion [3]. However, several series have reported a few cases of atypical CTX with normal cholestanol levels but with biallelic CYP27A1 pathogenic variants [4].…”
Section: Tuberous Xanthomatosis Is Not Necessarily Associated With In...mentioning
“…Interestingly, such individuals may carry the same variants (eg, p.Arg395Cys) that are found in patients with neurological involvement, suggesting that perhaps additional damaging mechanisms or genetic modifiers other than CYP27A1 loss of function may be at play. Reinforcing this enigmatic picture is the report of a pair of siblings carrying the same pathogenic variants but being at opposite ends of the clinical spectrum, where one sibling developed rare spinal xanthomatosis and the other developed a mild form with minor tendon xanthomas [ 43 ]. In contrast, examples of common clinical manifestation are well documented.…”
Background
Cerebrotendinous xanthomatosis (CTX) is a rare recessive genetic disease characterized by disruption of bile acid synthesis due to inactivation of the CYP27A1 gene. Treatment is available in the form of bile acid replacement. CTX is likely underdiagnosed, and prevalence estimates based on case diagnosis are probably inaccurate. Large population-based genomic databases are a valuable resource to estimate prevalence of rare recessive diseases as an orthogonal unbiased approach building upon traditional epidemiological studies.
Methods
We leveraged the Hardy–Weinberg principle and allele frequencies from gnomAD to calculate CTX prevalence. ClinVar and HGMD were used to identify high-confidence pathogenic missense variants and to calculate a disease-specific cutoff. Variant pathogenicity was also assessed by the VarSome implementation of the ACMG/AMP algorithm and the REVEL in silico predictor.
Results
CTX prevalence estimates were highest in Asians (1:44,407–93,084) and lowest in the Finnish population (1:3,388,767). Intermediate estimates were found in Europeans, Americans, and Africans/African Americans (1:70,795–233,597). The REVEL-predicted pathogenic variants accounted for a greater increase in prevalence estimates for Europeans, Americans, and Africans/African Americans compared with Asians. We identified the most frequent alleles designated pathogenic in ClinVar (p.Gly472Ala, p.Arg395Cys), labeled pathogenic based on sequence consequence (p.Met1?), and predicted to be pathogenic by REVEL (p.Met383Lys, p.Arg448His) across populations. Also, we provide a prospective geographic map of estimated disease distribution based on CYP27A1 variation queries performed by healthcare providers from selected specialties.
Conclusions
Prevalence estimates calculated herein support and expand upon existing evidence indicating underdiagnosis of CTX, suggesting that improved detection strategies are needed. Increased awareness of CTX is important for early diagnosis, which is essential for patients as early treatment significantly slows or prevents disease progression.
“…Interestingly, such individuals may carry the same variants (eg, p.Arg395Cys) that are found in patients with neurological involvement, suggesting that perhaps additional damaging mechanisms or genetic modi ers other than CYP27A1 loss of function may be at play. Reinforcing this enigmatic picture is the report of a pair of siblings carrying the same pathogenic variants but being at opposite ends of the clinical spectrum, where one sibling developed rare spinal xanthomatosis and the other developed a mild form with minor tendon xanthomas [43]. In contrast, examples of common clinical manifestation are well documented.…”
Background: Cerebrotendinous xanthomatosis (CTX) is a rare recessive genetic disease characterized by disruption of bile acid synthesis due to inactivation of the CYP27A1 gene. Treatment is available in the form of bile acid replacement. CTX is likely underdiagnosed, and prevalence estimates based on case diagnosis are probably inaccurate. Large population-based genomic databases are a valuable resource to estimate prevalence of rare recessive diseases as an orthogonal unbiased approach building upon traditional epidemiological studies. Methods: We leveraged the Hardy-Weinberg principle and allele frequencies from gnomAD to calculate CTX prevalence. ClinVar and HGMD were used to identify high-confidence pathogenic missense variants and to calculate a disease-specific cutoff. Variant pathogenicity was also assessed by the VarSome implementation of the ACMG/AMP algorithm and the REVEL in silico predictor. Results: CTX prevalence estimates were highest in Asians (1:44,407-93,084) and lowest in the Finnish population (1:3,388,767). Intermediate estimates were found in Europeans, Americans, and Africans/African Americans (1:70,795-233,597). The REVEL-predicted pathogenic variants accounted for a greater increase in prevalence estimates for Europeans, Americans, and Africans/African Americans compared with Asians. We identified the most frequent alleles designated pathogenic in ClinVar (p.Gly472Ala, p.Arg395Cys), labeled pathogenic based on sequence consequence (p.Met1?), and predicted to be pathogenic by REVEL (p.Met383Lys, p.Arg448His) across populations. Also, we provide a prospective geographic map of estimated disease distribution based on CYP27A1 variation queries performed by healthcare providers from selected specialties. Conclusions: Prevalence estimates calculated herein support and expand upon existing evidence indicating underdiagnosis of CTX, suggesting that improved detection strategies are needed. Increased awareness of CTX is important for early diagnosis, which is essential for patients as early treatment significantly slows or prevents disease progression.
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