Expression analysis of rice A20/AN1-type zinc finger genes and characterization of ZFP177 that contributes to temperature stress tolerance

Huang, Ji; Wang, Meimei; Jiang, Yan; Bao, Yongmei; Huang, Xi; Sun, Hui; Xu, Dongqing; Lan, Hongxia; Zhang, Hongsheng

doi:10.1016/j.gene.2008.05.019

Cited by 115 publications

(110 citation statements)

References 39 publications

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“…The relative quantification relates the PCR signal of the target transcript in stress-treated rice seedlings to that of rice seedlings grown under normal conditions. The expression level of all MTase genes in roots, shoots, and different organs of rice plants and in the japonica and indica rice cultivars was analyzed as reported previously (Huang et al, 2008).…”

Section: Quantitative Real-time Pcrmentioning

confidence: 99%

Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.)

Ahmad¹,

Huang²,

Lan³

et al. 2014

Genet. Mol. Res.

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ABSTRACT. Cytosine DNA methylation is a conserved epigenetic regulatory mechanism in both plants and animals. DNA methyltransferases (DNA MTases) not only initiate (de novo) but also maintain the process of DNA methylation. Here, we characterized the genome-wide expression profiles of 10 cytosine DNA MTase genes belonging to 4 subfamilies, MET1, CMT, DNMT2, and DRM, in rice. Tissue-specific gene expression analysis showed that all family members varied widely in their expression and specificities and might be involved in some basic metabolic pathways. Similarly, the expression of all rice cytosine DNA MTase genes was not regulated by plant hormones except OsDRM1a and OsDRM1b, which were downregulated by jasmonic acid. The transcription level of 10 genes in rice shoots and roots was also measured under salt and osmotic stress. Meanwhile, quantitative polymerase chain reaction data of the japonica and indica rice cultivars revealed that there is large variation in the expression activities of all genes. The results provide a foundation to further explore the roles of DNA MTases and the epigenetic regulation of abiotic stress responses in rice.

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Section: Quantitative Real-time Pcrmentioning

confidence: 99%

Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.)

Ahmad¹,

Huang²,

Lan³

et al. 2014

Genet. Mol. Res.

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“…38 Os07g0168800 corresponds to ZFP177, a member of the A20/AN1-type zinc finger family gene, which is associated with temperature stress tolerance as well as oxidative stress tolerance. 39 ROS such as hydrogen peroxide and super oxide anion are known as key signaling molecules that regulate various processes including pathogen defense, programmed cell death and stomatal behavior and coordinate responses to biotic and abiotic stresses in plants. 40 It has been reported that ROS production and accumulation was induced in Arabidopsis root at 6 h after -N, -P and -K treatments.…”

mentioning

confidence: 99%

Global transcriptome profile of rice root in response to essential macronutrient deficiency

Takehisa

Satō

Antonio

et al. 2013

Plant Signaling & Behavior

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“…In microarray studies, many transcription factors were found up-regulated under drought, salt, and cold [10,13,21,41,46]. Microarray analysis is potential tool; however mRNA and protein levels cannot be correlated due to the inability of total mRNA to translate into protein.…”

Section: Resultsmentioning

confidence: 99%

Research on the Rice Proteome: The Contribution of Proteomics Technology in the Creation of Abiotic Stress-Tolerant Plants

Komatsu

2008

Rice

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Proteomics techniques have identified a vast number of proteins that participate in the growth of plants or their adaptation to environmental stresses. Functional analysis of those proteins will contribute to the development of high-yielding crops through artificial manipulation of the basic life phenomena of plants or through the assessment of their stress tolerance. The conditions in almost all farmlands are suboptimal for plant growth, resulting in a calculation that causes the loss to three quarters of the potential yield of crops. Breeding of stresstolerant cultivars has been hampered by the paucity of information on molecular events underlying stress tolerance. A comparative analysis of the response of plants to stress at the protein level, together with physiological measurements, will assist in identifying the genes and pathways that are crucial for stress tolerance. This review examines analyses of the rice proteome under abiotic stress and the potential contribution of proteomics technology in the creation of abiotic stress-tolerant plants.

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Expression analysis of rice A20/AN1-type zinc finger genes and characterization of ZFP177 that contributes to temperature stress tolerance

Cited by 115 publications

References 39 publications

Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.)

Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.)

Global transcriptome profile of rice root in response to essential macronutrient deficiency

Research on the Rice Proteome: The Contribution of Proteomics Technology in the Creation of Abiotic Stress-Tolerant Plants

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