Standard optical sensors such as backscattering instruments and chlorophyll fluorometers provide high spatial resolution with limited information about the particles within the sample. Methods involving the analysis of water samples, such as microscopic examination, flow cytometery, laboratory particle size analyzers, and HPLC analysis of pigments, provide low spatial resolution but produce high levels of information about the particles. Phytoplankton ecology studies would benefit from the ability to describe phytoplankton diversity at high spatial and temporal resolution. Of particular interest to detect and quantify are species that produce red tide and harmful algal bloom (HAB) events because of their significant impacts on human health, marine life, and fisheries (Hallegraeff 2003;Glibert et al. 2005;Kudela et al. 2005).Here we present methods for describing phytoplankton patchiness in situ by the application of a Laser In Situ Scattering and Transmissometry (LISST-100) instrument. The LISST-100 was originally designed and tested for sediment particles (Traykovski et al. 1999;Michelson and Pejrup 2001) and has been applied to studies of bacteria and phytoplankton populations in shallow (16 m) coastal waters and lakes (Serra 2001;Serra et al. 2002aSerra et al. , 2002b. In our application of the LISST to study coastal ocean phytoplankton populations, particle concentrations are lower than those of previous LISST applications. Therefore, we increased the sensitivity of our instrument by a factor of ten. We verified the LISST's ability to describe oceanic phytoplankton by comparing cell dimensions measured by the LISST with those measured using a microscope. These lab studies included cultures of dinoflagellates and diatoms, measured as monocultures and mixed cultures of different size classes.The field program consisted of a 5-week time-series study of phytoplankton ecology in Monterey Bay, California (Fig. 1). Intensive in situ measurements during this study detailed development of two phytoplankton blooms: (1) a bloom of pennate diatoms of the genus Pseudo-nitzschia, some of which are HAB species (Scholin et al. 2000), and (2)
AbstractA primary limitation of phytoplankton ecology research is the difficulty of describing patchiness and distributions of different phytoplankton groups. Chlorophyll fluorescence and optical backscatter are useful measurements that provide information about phytoplankton, but these measurements do not allow distinction of phytoplankton taxa. Traditional phytoplankton identification methods (such as microscopy, HPLC analysis, and flow cytometry) are labor intensive and therefore can provide only very limited coverage and resolution. Through lab experiments we show that the Laser In Situ Scattering and Transmissometer (LISST-100) instrument can accurately quantify phytoplankton cell dimensions for some cell shapes. Pseudo-spherical dinoflagellates are described with a single peak in the particle size distribution (PSD) at the cross-sectional dimension of the cells. Pennate diatoms ...